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  5. Dcu_g08500

Dcu_g08500 (VAC1, ECB2, ATECB2)


Aliases : VAC1, ECB2, ATECB2

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g08500
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00270380 OTP86,... RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
AMTR_s00010p00220510 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
AMTR_s00011p00266560 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
AMTR_s00019p00093260 SLO1,... Pentatricopeptide repeat-containing protein At2g22410,... 0.04 OrthoFinder output from all 47 species
Adi_g079818 CRR2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g37868 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g10918 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g16632 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g24374 MEF19 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g31151 EMB2758 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g36208 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g39090 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g06883 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g16177 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g06042 CRR22 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g08814 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23758 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g23935 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g25532 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g68065 CRR22 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g68078 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g06548 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g21995 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67712 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.1Z201600.1 Ceric.1Z201600 not classified & original description: pacid=50565787... 0.04 OrthoFinder output from all 47 species
Dac_g05580 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18787 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g54307 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g04437 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g07729 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g10210 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g38110 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g48395 No alias ssDNA-binding protein *(OSB) & original description: none 0.08 OrthoFinder output from all 47 species
Nbi_g20268 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g29271 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g11120 REME1 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Ppi_g32279 MEF21 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g62867 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004227 No alias not classified & original description: CDS=1-2520 0.03 OrthoFinder output from all 47 species
Sam_g07051 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo94780 VAC1, ECB2, ATECB2 Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Solyc01g095160.3.1 Solyc01g095160 Pentatricopeptide repeat-containing protein At4g37170... 0.04 OrthoFinder output from all 47 species
Spa_g20260 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g53369 EMB2758 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g06393 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g17460 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g27180 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g27339 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g43886 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g44700 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e012422_P001 OSB1, Zm00001e012422 ssDNA-binding protein (OSB) 0.04 OrthoFinder output from all 47 species
Zm00001e041694_P001 Zm00001e041694 Pentatricopeptide repeat-containing protein At5g16860... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
InterPro domains Description Start Stop
IPR046848 E_motif 42 100
No external refs found!