Dcu_g08616


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g08616

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00145640 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
AMTR_s00068p00031610 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Ala_g07887 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g15073 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g16414 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g17536 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g23774 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g27276 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g28362 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g30691 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g31164 SLO1 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g34015 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g35743 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g36524 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g37258 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g04634 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g28323 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g13662 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g06339 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g06945 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g33116 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g39483 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g40796 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g43978 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g05762 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dde_g11730 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g42846 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g49909 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g07460 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12271 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19229 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g21750 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g25136 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01033906001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os01g72049.1 PTAC9, OSB2,... ssDNA-binding protein (OSB). TAC9 cofactor of... 0.02 OrthoFinder output from all 47 species
Len_g04775 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g06676 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g11799 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g03474 REME1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g14419 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g34466 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Msp_g45873 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g03792 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g04955 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g19585 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g32187 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g38648 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g42021 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Pir_g60343 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13105 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18809 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g31376 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g43237 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16299 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16744 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g19039 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g51436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo111982 No alias Pentatricopeptide repeat-containing protein At5g66520... 0.04 OrthoFinder output from all 47 species
Smo91949 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
Solyc02g094480.4.1 Solyc02g094480 RNA editing factor (MEF14) 0.03 OrthoFinder output from all 47 species
Solyc03g096610.2.1 Solyc03g096610 Pentatricopeptide repeat-containing protein At1g33350... 0.04 OrthoFinder output from all 47 species
Solyc09g090440.1.1 LPA66, Solyc09g090440 Pentatricopeptide repeat-containing protein At5g66520... 0.06 OrthoFinder output from all 47 species
Spa_g05402 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21307 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g27690 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g27926 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g33712 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Spa_g54818 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g06393 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g07829 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e031693_P001 Zm00001e031693 Pentatricopeptide repeat-containing protein At4g14050,... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 185 232
IPR002885 Pentatricopeptide_repeat 287 335
IPR002885 Pentatricopeptide_repeat 83 130
No external refs found!