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  5. Dcu_g08881

Dcu_g08881


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g08881
Cluster HCCA: Cluster_208

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00268260 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Aop_g67869 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g69999 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0652.g081079 No alias not classified & original description: CDS=1-2169 0.05 OrthoFinder output from all 47 species
Cba_g07168 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07412 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20419 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g25710 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29882 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g78717 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05649 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g34327 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g14457 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015571 No alias not classified & original description: CDS=1-1581 0.02 OrthoFinder output from all 47 species
Sam_g06616 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e026664_P002 Zm00001e026664 RNA editing factor (BLX) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 551 598
IPR002885 Pentatricopeptide_repeat 349 396
IPR002885 Pentatricopeptide_repeat 46 92
IPR002885 Pentatricopeptide_repeat 146 193
IPR002885 Pentatricopeptide_repeat 248 294
IPR002885 Pentatricopeptide_repeat 449 497
IPR046848 E_motif 669 706
IPR002885 Pentatricopeptide_repeat 625 649
IPR002885 Pentatricopeptide_repeat 121 144
IPR002885 Pentatricopeptide_repeat 323 347
No external refs found!