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  5. Dcu_g08889

Dcu_g08889


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g08889
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00062590 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
Aev_g20571 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g33897 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g46412 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24418 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g37976 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g05247 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g05785 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g06777 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06904 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g39230 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene19500.t1 Aspi01Gene19500 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0040.g026593 CRR22 not classified & original description: CDS=1-1842 0.03 OrthoFinder output from all 47 species
Cba_g22830 OSB4 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g35519 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g45697 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g66997 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.26G035200.1 Ceric.26G035200 not classified & original description: pacid=50599772... 0.03 OrthoFinder output from all 47 species
Dac_g14167 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g42852 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g02935 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g09173 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g17623 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g46791 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13294 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_37976 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g12672 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18041 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18069 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18306 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18590 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18856 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07416 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g03209 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28765 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g22808 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g23526 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g32012 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g33905 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g19567 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g64875 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g29583 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g48450 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61252 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g16744 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 450 473
IPR002885 Pentatricopeptide_repeat 248 270
IPR002885 Pentatricopeptide_repeat 147 169
IPR002885 Pentatricopeptide_repeat 652 676
IPR002885 Pentatricopeptide_repeat 678 724
IPR002885 Pentatricopeptide_repeat 173 219
IPR002885 Pentatricopeptide_repeat 274 320
IPR002885 Pentatricopeptide_repeat 374 422
IPR002885 Pentatricopeptide_repeat 71 118
IPR002885 Pentatricopeptide_repeat 475 522
IPR002885 Pentatricopeptide_repeat 576 624
No external refs found!