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  5. Dcu_g09067

Dcu_g09067


Description : not classified & original description: none


Gene families : OG0007862 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007862_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g09067

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00129550 evm_27.TU.AmTr_v1... Protein LOW PSII ACCUMULATION 1, chloroplastic... 0.02 OrthoFinder output from all 47 species
AT4G28740 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.04 OrthoFinder output from all 47 species
Aev_g02215 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g07202 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.32G001900.1 Ceric.32G001900 not classified & original description: pacid=50598721... 0.03 OrthoFinder output from all 47 species
Cre06.g266900 No alias Protein LOW PSII ACCUMULATION 1, chloroplastic... 0.08 OrthoFinder output from all 47 species
Dac_g07193 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g11518 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os04g42800.1 LOC_Os04g42800 Protein LOW PSII ACCUMULATION 1, chloroplastic... 0.04 OrthoFinder output from all 47 species
Len_g09241 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Lfl_g01177 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
MA_10430747g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp7g15330.1 No alias Protein LOW PSII ACCUMULATION 1, chloroplastic... 0.02 OrthoFinder output from all 47 species
Ore_g00347 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g19021 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Pnu_g10680 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0051.g013941 No alias not classified & original description: CDS=1-1122 0.06 OrthoFinder output from all 47 species
Sam_g11106 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc09g063140.4.1 Solyc09g063140 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g22705 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g00565 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
BP GO:0010206 photosystem II repair IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0030091 protein repair IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0046422 violaxanthin de-epoxidase activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR021883 LPA1-like 94 170
No external refs found!