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  5. Dcu_g09878

Dcu_g09878


Description : not classified & original description: none


Gene families : OG0002427 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002427_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g09878

Target Alias Description ECC score Gene Family Method Actions
AT4G33400 No alias Vacuolar import/degradation, Vid27-related protein 0.11 OrthoFinder output from all 47 species
Ala_g23497 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
Als_g12821 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species
Aop_g00721 No alias not classified & original description: none 0.18 OrthoFinder output from all 47 species
Aspi01Gene00286.t1 Aspi01Gene00286 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0261.g060766 No alias not classified & original description: CDS=317-2245 0.11 OrthoFinder output from all 47 species
Ceric.22G002700.1 Ceric.22G002700 not classified & original description: pacid=50615126... 0.19 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021432.34 No alias Protein CYPRO4 OS=Cynara cardunculus 0.02 OrthoFinder output from all 47 species
GSVIVT01009497001 No alias Protein CYPRO4 OS=Cynara cardunculus 0.17 OrthoFinder output from all 47 species
LOC_Os02g08190.1 LOC_Os02g08190 Protein CYPRO4 OS=Cynara cardunculus... 0.12 OrthoFinder output from all 47 species
Len_g12390 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Lfl_g37219 No alias not classified & original description: none 0.15 OrthoFinder output from all 47 species
MA_12899g0010 No alias Protein CYPRO4 OS=Cynara cardunculus... 0.13 OrthoFinder output from all 47 species
Msp_g32123 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g02206 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g19394 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Solyc04g078940.3.1 Solyc04g078940 Protein CYPRO4 OS=Cynara cardunculus... 0.06 OrthoFinder output from all 47 species
Spa_g13061 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g04658 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Zm00001e013808_P001 Zm00001e013808 Protein CYPRO4 OS=Cynara cardunculus... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
CC GO:0031262 Ndc80 complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0051315 attachment of mitotic spindle microtubules to kinetochore IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
CC GO:0099080 supramolecular complex IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR013863 VID27_C 296 563
No external refs found!