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  5. Dcu_g10363

Dcu_g10363


Description : not classified & original description: none


Gene families : OG0000359 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000359_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g10363
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00100040 evm_27.TU.AmTr_v1... 4-coumarate--CoA ligase-like 5 OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
Adi_g020210 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g64460 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g18797 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g25397 OPCL1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g30890 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G077700.1 Ceric.11G077700 not classified & original description: pacid=50595996... 0.03 OrthoFinder output from all 47 species
Ceric.36G025100.1 OPCL1, Ceric.36G025100 not classified & original description: pacid=50568001... 0.04 OrthoFinder output from all 47 species
Gb_19726 OPCL1 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os01g67530.1 LOC_Os01g67530 4-coumarate--CoA ligase-like 5 OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
LOC_Os01g67540.1 LOC_Os01g67540 4-coumarate--CoA ligase-like 6 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
LOC_Os03g04000.1 OPCL1, LOC_Os03g04000 OPC-8:CoA synthetase 0.02 OrthoFinder output from all 47 species
LOC_Os03g05780.1 LOC_Os03g05780 4-coumarate--CoA ligase-like 1 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Len_g14710 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01742 OPCL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10432138g0010 OPCL1 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp1g04990.1 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Msp_g20427 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15274 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g29127 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo123905 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Smo143817 OPCL1 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc03g111170.3.1 Solyc03g111170 4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g21116 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12748 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004865_P001 Zm00001e004865 4-coumarate--CoA ligase-like 1 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004852 uroporphyrinogen-III synthase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0010011 auxin binding IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP HCCA
MF GO:0042562 hormone binding IEP HCCA
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 456 531
IPR000873 AMP-dep_Synth/Lig_com 42 447
No external refs found!