Description : not classified & original description: none
Gene families : OG0000484 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000484_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Dcu_g10607 | |
| Cluster | HCCA: Cluster_176 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G34200 | No alias | RING/FYVE/PHD zinc finger superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT5G59000 | No alias | RING/FYVE/PHD zinc finger superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.06G036800.1 | Ceric.06G036800 | not classified & original description: pacid=50620077... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.15G009300.1 | Ceric.15G009300 | E3 ubiquitin ligase & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g08936 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os06g46366.1 | LOC_Os06g46366 | RING-v-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g04526 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_10434983g0010 | No alias | RING-v-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| Solyc07g055215.1.1 | Solyc07g055215 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e014864_P002 | Zm00001e014864 | RING-v-class E3 ligase | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
| MF | GO:0005516 | calmodulin binding | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006298 | mismatch repair | IEP | HCCA |
| BP | GO:0006950 | response to stress | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| MF | GO:0008483 | transaminase activity | IEP | HCCA |
| MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | HCCA |
| MF | GO:0019842 | vitamin binding | IEP | HCCA |
| MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
| MF | GO:0030983 | mismatched DNA binding | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0050896 | response to stimulus | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR011016 | Znf_RING-CH | 165 | 215 |
| No external refs found! |
