Dcu_g11842


Description : not classified & original description: none


Gene families : OG0000198 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000198_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g11842

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00136030 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.02 OrthoFinder output from all 47 species
AMTR_s00086p00121550 evm_27.TU.AmTr_v1... Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT5G53600 No alias Carbohydrate-binding X8 domain superfamily protein 0.01 OrthoFinder output from all 47 species
Ceric.16G030300.1 Ceric.16G030300 not classified & original description: pacid=50589646... 0.02 OrthoFinder output from all 47 species
LOC_Os01g55820.1 LOC_Os01g55820 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os07g40940.1 PDCB2, E13L3,... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_962758g0010 No alias Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Pir_g55633 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g058080.3.1 Solyc04g058080 Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc05g016390.4.1 Solyc05g016390 Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g05029 PDCB5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g46844 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006665 sphingolipid metabolic process IEP HCCA
BP GO:0006672 ceramide metabolic process IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0072488 ammonium transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR012946 X8 61 136
No external refs found!