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  5. Dcu_g12135

Dcu_g12135 (HSFA1B, ATHSF3, HSF3, ATHSFA1B)


Aliases : HSFA1B, ATHSF3, HSF3, ATHSFA1B

Description : HSF-type transcription factor & original description: none


Gene families : OG0000093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g12135
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00075850 HSFA1B, ATHSF3,... RNA biosynthesis.transcriptional activation.HSF (heat... 0.02 OrthoFinder output from all 47 species
Adi_g056671 HSFA1B, ATHSF3,... transcriptional regulator *(HsfA1) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g27045 HSFA1B, ATHSF3,... transcriptional regulator *(HsfA1) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55061.t1 HSFB4, SCZ,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05832 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g18540 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.20G059100.1 ATHSF1, HSF1,... transcriptional regulator *(HsfA1) & original... 0.04 OrthoFinder output from all 47 species
Cre09.g387150 ATHSF1, HSF1,... RNA biosynthesis.transcriptional activation.HSF (heat... 0.01 OrthoFinder output from all 47 species
Dac_g13545 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g20880 AT-HSFA6B, HSFA6B not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10301 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26513 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g03202 HSFA1B, ATHSF3,... transcriptional regulator *(HsfA1) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g27595 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g21014 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g32244 HSFA1B, ATHSF3,... transcriptional regulator *(HsfA1) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g36415 AT-HSFB2B, HSFB2B HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05097 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g06000 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12831 AT-HSFA6B, HSFA6B HSF-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g57933 AT-HSFA6B, HSFA6B HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e020490_P001 AT-HSFA6B,... transcription factor (HSF) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
InterPro domains Description Start Stop
IPR000232 HSF_DNA-bd 46 178
No external refs found!