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  5. Dcu_g12680

Dcu_g12680


Description : subfamily ABCG transporter & original description: none


Gene families : OG0000438 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000438_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g12680

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00214480 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
AMTR_s00134p00069640 ABCG25,... Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
AT3G13220 ABCG26, WBC27 ABC-2 type transporter family protein 0.02 OrthoFinder output from all 47 species
Als_g16669 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g29670 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g63592 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01671.t1 Aspi01Gene01671 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0073.g037209 No alias subfamily ABCG transporter & original description: CDS=211-2310 0.04 OrthoFinder output from all 47 species
Ceric.30G014400.1 Ceric.30G014400 subfamily ABCG transporter & original description:... 0.06 OrthoFinder output from all 47 species
GSVIVT01022526001 No alias Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Gb_00289 ABCG26, WBC27 sporopollenin precursor exporter. subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Gb_31556 No alias subfamily ABCG transporter 0.01 OrthoFinder output from all 47 species
LOC_Os08g07010.1 ABCG14, LOC_Os08g07010 subfamily ABCG transporter 0.01 OrthoFinder output from all 47 species
Len_g13042 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g30819 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
MA_4863g0010 ABCG26, WBC27 sporopollenin precursor exporter. subfamily ABCG transporter 0.01 OrthoFinder output from all 47 species
MA_65845g0010 No alias subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
MA_81274g0010 ABCG14 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Mp6g05900.1 ABCG14 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Nbi_g01338 No alias subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g25470 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15519 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03210 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015589 No alias not classified & original description: CDS=22-1557 0.03 OrthoFinder output from all 47 species
Solyc04g006960.3.1 Solyc04g006960 cytokinin transporter (ABCG14). subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Solyc07g065780.2.1 ABCG26, WBC27,... ABC transporter G family member 26 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc08g005580.3.1 ABCG14, Solyc08g005580 cytokinin transporter (ABCG14). subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Solyc12g013640.2.1 Solyc12g013640 subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Spa_g06146 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26315 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g12945 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e037432_P001 ABCG26, WBC27,... sporopollenin precursor exporter. subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 525 734
IPR003439 ABC_transporter-like_ATP-bd 220 373
No external refs found!