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  5. Dcu_g13202

Dcu_g13202 (RAP2.2)


Aliases : RAP2.2

Description : transcription factor component *(HRE/RAP2.12) of oxygen-sensor activity & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g13202
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00099690 RAP2.6,... Ethylene-responsive transcription factor ERF110... 0.03 OrthoFinder output from all 47 species
AMTR_s00010p00240320 LEP,... Ethylene-responsive transcription factor FZP OS=Oryza... 0.03 OrthoFinder output from all 47 species
AMTR_s00021p00184450 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AMTR_s00089p00102760 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AT5G44210 ATERF-9, ERF9, ATERF9 erf domain protein 9 0.03 OrthoFinder output from all 47 species
AT5G47230 ERF5, ATERF-5, ATERF5 ethylene responsive element binding factor 5 0.03 OrthoFinder output from all 47 species
Aspi01Gene17041.t1 Aspi01Gene17041 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g10614 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.15G043800.1 HRE2, Ceric.15G043800 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
GSVIVT01022076001 DEAR3 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
Gb_35633 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g21120.1 HRE2, LOC_Os01g21120 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os02g34260.1 Rap2.6L, LOC_Os02g34260 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os02g34270.1 ERF110, LOC_Os02g34270 Ethylene-responsive transcription factor ERF114... 0.03 OrthoFinder output from all 47 species
LOC_Os11g06770.2 ERF110, LOC_Os11g06770 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Lfl_g20776 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
MA_10432800g0020 CRF3 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
MA_132427g0010 No alias transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
MA_500288g0010 ABI4, SAN5,... transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
MA_8574268g0010 TINY2 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Ore_g22337 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g38654 RAP2.11 transcription factor *(ERN1) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g17545 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c2_5620V3.1 Pp3c2_5620 Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002282 No alias subgroup ERF-VI transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012392 No alias not classified & original description: CDS=107-2506 0.03 OrthoFinder output from all 47 species
Solyc05g013540.1.1 DRN-LIKE, ESR2,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc08g008305.1.1 Solyc08g008305 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Zm00001e014413_P001 Zm00001e014413 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Zm00001e023816_P001 Zm00001e023816 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e030279_P001 ATERF3, ERF3,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e035811_P001 PUCHI, Zm00001e035811 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Zm00001e036130_P001 RAP2.4, Zm00001e036130 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Zm00001e037241_P001 Zm00001e037241 transcription factor (DREB) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 130 178
No external refs found!