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  5. Dcu_g13413

Dcu_g13413


Description : subfamily ABCG transporter & original description: none


Gene families : OG0000438 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000438_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g13413
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00258490 ABCG14,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
AMTR_s00057p00214480 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
AMTR_s00061p00187570 ABCG26, WBC27,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
AMTR_s00134p00069640 ABCG25,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
AT1G31770 ABCG14 ATP-binding cassette 14 0.02 OrthoFinder output from all 47 species
AT5G06530 No alias ABC-2 type transporter family protein 0.02 OrthoFinder output from all 47 species
Ala_g14776 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21658 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10922.t1 Aspi01Gene10922 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.13G008600.1 Ceric.13G008600 subfamily ABCG transporter & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.34G074000.1 Ceric.34G074000 not classified & original description: pacid=50622980... 0.04 OrthoFinder output from all 47 species
Dac_g16939 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g47725 ABCG26, WBC27 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g02890 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06170 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01001660001 No alias Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
GSVIVT01014402001 No alias Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
Gb_00289 ABCG26, WBC27 sporopollenin precursor exporter. subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
LOC_Os06g40550.1 ABCG26, WBC27,... sporopollenin precursor exporter. subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Len_g07347 ABCG26, WBC27 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g30819 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39753 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_81274g0010 ABCG14 subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Mp6g05900.1 ABCG14 subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Msp_g10212 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g10128 ABCG26, WBC27 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29229 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35834 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13582 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03210 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g006960.3.1 Solyc04g006960 cytokinin transporter (ABCG14). subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species
Solyc07g065770.3.1 ABCG26, WBC27,... ABC transporter G family member 26 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc07g065780.2.1 ABCG26, WBC27,... ABC transporter G family member 26 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc08g005580.3.1 ABCG14, Solyc08g005580 cytokinin transporter (ABCG14). subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Solyc12g013640.2.1 Solyc12g013640 subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Zm00001e037432_P001 ABCG26, WBC27,... sporopollenin precursor exporter. subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0004096 catalase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 206 357
IPR043926 ABCG_dom 386 450
IPR013525 ABC_2_trans 521 730
No external refs found!