Description : regulatory protein *(SHOU4) involved in cellulose synthase trafficking & original description: none
Gene families : OG0000929 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000929_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Dcu_g14768 | |
| Cluster | HCCA: Cluster_90 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00007p00249170 | evm_27.TU.AmTr_v1... | Uncharacterized membrane protein At1g16860... | 0.04 | OrthoFinder output from all 47 species | |
| AT1G16860 | No alias | Ubiquitin-specific protease family C19-related protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G22290 | No alias | Ubiquitin-specific protease family C19-related protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g014699 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g074098 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g11688 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.05 | OrthoFinder output from all 47 species | |
| Aev_g18177 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g02232 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g01771 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.06 | OrthoFinder output from all 47 species | |
| Als_g15204 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g11781 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g02864 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.07 | OrthoFinder output from all 47 species | |
| Azfi_s0073.g037099 | No alias | not classified & original description: CDS=1146-2774 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g02031 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.10G017500.1 | Ceric.10G017500 | regulatory protein *(SHOU4) involved in cellulose... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.12G073600.1 | Ceric.12G073600 | regulatory protein *(SHOU4) involved in cellulose... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.18G001900.1 | Ceric.18G001900 | regulatory protein *(SHOU4) involved in cellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g03755 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.06 | OrthoFinder output from all 47 species | |
| Dac_g08975 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g11604 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g26820 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g02263 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.06 | OrthoFinder output from all 47 species | |
| Ehy_g05868 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g06678 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g07030 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01016057001 | No alias | Uncharacterized membrane protein At1g16860... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_22203 | No alias | SHOU4-type cellulose synthase CSC-interactive protein | 0.03 | OrthoFinder output from all 47 species | |
| Gb_33458 | No alias | SHOU4-type cellulose synthase CSC-interactive protein | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os04g51710.1 | LOC_Os04g51710 | SHOU4-type cellulose synthase CSC-interactive protein | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os08g13350.1 | LOC_Os08g13350 | SHOU4-type cellulose synthase CSC-interactive protein | 0.03 | OrthoFinder output from all 47 species | |
| Len_g04751 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g29225 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.04 | OrthoFinder output from all 47 species | |
| MA_9168g0010 | No alias | SHOU4-type cellulose synthase CSC-interactive protein | 0.07 | OrthoFinder output from all 47 species | |
| Nbi_g05342 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g10144 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g25398 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g01330 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.05 | OrthoFinder output from all 47 species | |
| Pnu_g04537 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g01208 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g40377 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g16842 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Smo170682 | No alias | Uncharacterized membrane protein At1g16860... | 0.08 | OrthoFinder output from all 47 species | |
| Smo438884 | No alias | Uncharacterized membrane protein At1g16860... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g014680.4.1 | Solyc04g014680 | Uncharacterized membrane protein At1g16860... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc12g017450.2.1 | Solyc12g017450 | SHOU4-type cellulose synthase CSC-interactive protein | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g16427 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g18006 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g25164 | No alias | regulatory protein *(SHOU4) involved in cellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e007013_P001 | Zm00001e007013 | SHOU4-type cellulose synthase CSC-interactive protein | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e041596_P001 | Zm00001e041596 | SHOU4-type cellulose synthase CSC-interactive protein | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000096 | sulfur amino acid metabolic process | IEP | HCCA |
| MF | GO:0003774 | cytoskeletal motor activity | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004489 | methylenetetrahydrofolate reductase (NAD(P)H) activity | IEP | HCCA |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| BP | GO:0006555 | methionine metabolic process | IEP | HCCA |
| BP | GO:0006790 | sulfur compound metabolic process | IEP | HCCA |
| BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | HCCA |
| BP | GO:0010215 | cellulose microfibril organization | IEP | HCCA |
| MF | GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity | IEP | HCCA |
| MF | GO:0015020 | glucuronosyltransferase activity | IEP | HCCA |
| CC | GO:0016020 | membrane | IEP | HCCA |
| CC | GO:0016459 | myosin complex | IEP | HCCA |
| MF | GO:0016645 | oxidoreductase activity, acting on the CH-NH group of donors | IEP | HCCA |
| MF | GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0016757 | glycosyltransferase activity | IEP | HCCA |
| MF | GO:0016758 | hexosyltransferase activity | IEP | HCCA |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | HCCA |
| MF | GO:0019842 | vitamin binding | IEP | HCCA |
| MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
| BP | GO:0030198 | extracellular matrix organization | IEP | HCCA |
| BP | GO:0043062 | extracellular structure organization | IEP | HCCA |
| BP | GO:0045229 | external encapsulating structure organization | IEP | HCCA |
| MF | GO:0051087 | chaperone binding | IEP | HCCA |
| MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
