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  5. Dcu_g15857

Dcu_g15857


Description : tRNA adenosine-methyltransferase *(TRM13) & original description: none


Gene families : OG0006177 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006177_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g15857

Target Alias Description ECC score Gene Family Method Actions
Ehy_g23285 No alias tRNA adenosine-methyltransferase *(TRM13) & original... 0.03 OrthoFinder output from all 47 species
LOC_Os03g61750.1 LOC_Os03g61750 tRNA adenosine-methyltransferase (TRM13) 0.04 OrthoFinder output from all 47 species
Ore_g34020 No alias tRNA adenosine-methyltransferase *(TRM13) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005666 RNA polymerase III complex IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006383 transcription by RNA polymerase III IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR007871 Methyltransferase_TRM13 221 529
IPR022776 TRM13/UPF0224_CHHC_Znf_dom 46 70
IPR021721 Znf_CCCH-type_TRM13 12 39
No external refs found!