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  5. Dcu_g16522

Dcu_g16522 (OTP84)


Aliases : OTP84

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g16522
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00127120 CRR22,... Pentatricopeptide repeat-containing protein At3g09040,... 0.02 OrthoFinder output from all 47 species
Adi_g004448 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g005549 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g022087 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034178 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036713 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036795 MEF19 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g066055 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g115114 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g16785 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g54955 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28193 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16691 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g35556 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g63229 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene30154.t1 Aspi01Gene30154 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45795.t1 Aspi01Gene45795 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0003.g007907 No alias not classified & original description: CDS=160-2841 0.03 OrthoFinder output from all 47 species
Azfi_s0035.g025580 No alias not classified & original description: CDS=174-2462 0.04 OrthoFinder output from all 47 species
Azfi_s0090.g042650 No alias not classified & original description: CDS=1-1848 0.04 OrthoFinder output from all 47 species
Azfi_s0288.g063250 No alias not classified & original description: CDS=1-2010 0.03 OrthoFinder output from all 47 species
Ceric.06G009700.1 VAC1, ECB2,... not classified & original description: pacid=50619980... 0.03 OrthoFinder output from all 47 species
Ceric.18G049100.1 Ceric.18G049100 not classified & original description: pacid=50621467... 0.02 OrthoFinder output from all 47 species
Ceric.20G051200.1 Ceric.20G051200 not classified & original description: pacid=50566546... 0.03 OrthoFinder output from all 47 species
Dac_g05106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08450 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g04370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_14392 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Len_g18929 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07727 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12447 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g21545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28789 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27823 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15704 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g18373 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001330 No alias not classified & original description: CDS=1-3081 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004138 No alias not classified & original description: CDS=1-2646 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010179 No alias not classified & original description: CDS=88-2685 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015411 No alias not classified & original description: CDS=1-3726 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0200.g025587 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0218.g026116 No alias not classified & original description: CDS=1-2901 0.03 OrthoFinder output from all 47 species
Sam_g11676 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g12585 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13516 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27517 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g47343 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27046 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g44640 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e013232_P001 Zm00001e013232 Pentatricopeptide repeat-containing protein At2g36730... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP HCCA
BP GO:0001932 regulation of protein phosphorylation IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0019900 kinase binding IEP HCCA
MF GO:0019901 protein kinase binding IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0042325 regulation of phosphorylation IEP HCCA
BP GO:0043549 regulation of kinase activity IEP HCCA
BP GO:0045859 regulation of protein kinase activity IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051338 regulation of transferase activity IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP HCCA
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP HCCA
InterPro domains Description Start Stop
IPR046849 Eplus_motif 569 596
IPR002885 Pentatricopeptide_repeat 284 332
IPR002885 Pentatricopeptide_repeat 386 434
IPR002885 Pentatricopeptide_repeat 214 253
IPR002885 Pentatricopeptide_repeat 113 161
IPR046848 E_motif 502 564
IPR002885 Pentatricopeptide_repeat 360 385
IPR002885 Pentatricopeptide_repeat 459 483
No external refs found!