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  5. Dcu_g16645

Dcu_g16645 (CRR22)


Aliases : CRR22

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g16645
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AT1G13410 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G14820 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.05 OrthoFinder output from all 47 species
AT4G21065 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Ala_g27912 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g05074 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g16798 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g23626 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04175 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0021.g015645 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-1737 0.05 OrthoFinder output from all 47 species
Azfi_s0232.g059290 No alias not classified & original description: CDS=1-3606 0.07 OrthoFinder output from all 47 species
Azfi_s0237.g059606 No alias not classified & original description: CDS=1-2121 0.05 OrthoFinder output from all 47 species
Cba_g04691 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g06540 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g06585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20185 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29653 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29689 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g32896 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.04G015100.1 Ceric.04G015100 not classified & original description: pacid=50632156... 0.03 OrthoFinder output from all 47 species
Dcu_g05677 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g06891 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g07713 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g07750 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08084 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g08595 CRR2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g08599 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08636 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g17207 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g17233 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dcu_g17242 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g19158 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g21216 OTP82 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g21328 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g23686 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g26397 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g26485 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g26818 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g26847 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g37654 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g38468 OTP86 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g38647 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g40949 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g42218 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g43173 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g43222 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g44865 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g45813 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g45923 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g47918 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g47937 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g47945 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g48764 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g50102 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g50973 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g46086 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g08265 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g13754 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g23775 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g24067 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g24804 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g27847 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g38541 OTP84 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g41061 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g01302 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g02088 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03644 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g06239 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g07306 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08923 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g09259 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g09990 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g12697 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g19928 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20793 CRR22 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g22640 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g36262 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g40481 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40875 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42269 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g43621 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g08487 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17744 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g43570 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007526 No alias not classified & original description: CDS=1-1728 0.05 OrthoFinder output from all 47 species
Spa_g15291 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13479 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g17147 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 277 325
IPR002885 Pentatricopeptide_repeat 379 425
IPR002885 Pentatricopeptide_repeat 480 526
IPR046848 E_motif 597 654
IPR002885 Pentatricopeptide_repeat 179 208
IPR002885 Pentatricopeptide_repeat 454 478
IPR002885 Pentatricopeptide_repeat 151 177
No external refs found!