1. Home
  2. Species
  3. Dicranopteris curranii
  4. Sequence
  5. Dcu_g16812

Dcu_g16812


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g16812

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00252800 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g39530... 0.02 OrthoFinder output from all 47 species
AMTR_s00033p00240190 evm_27.TU.AmTr_v1... Cell cycle.organelle machineries.DNA... 0.02 OrthoFinder output from all 47 species
AMTR_s00067p00084250 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g27110... 0.02 OrthoFinder output from all 47 species
AMTR_s00088p00045930 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g13880... 0.02 OrthoFinder output from all 47 species
AMTR_s03531p00004900 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g02330,... 0.02 OrthoFinder output from all 47 species
AT1G50270 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g005699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g007371 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g017329 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036666 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036711 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g049668 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g098053 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g098874 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g112689 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g22000 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g42493 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g49175 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g14569 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g17191 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g33929 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07162 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g63751 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g09402 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g16161 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g18696 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g24083 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27606 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g28679 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g36874 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g36888 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37344 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02020 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02659 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g16640 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17427 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g24623 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g31135 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68030 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02568.t1 Aspi01Gene02568 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13090.t2 Aspi01Gene13090 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23581.t1 Aspi01Gene23581 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41775.t1 Aspi01Gene41775 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0001.g000442 No alias not classified & original description: CDS=1-3240 0.04 OrthoFinder output from all 47 species
Azfi_s0001.g000621 No alias ssDNA-binding protein *(OSB) & original description: CDS=97-654 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g000814 CRR22 not classified & original description: CDS=1-2214 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g010669 No alias not classified & original description: CDS=1-3072 0.03 OrthoFinder output from all 47 species
Azfi_s0021.g015640 No alias not classified & original description: CDS=1-1965 0.04 OrthoFinder output from all 47 species
Azfi_s0099.g044113 No alias not classified & original description: CDS=1-1752 0.03 OrthoFinder output from all 47 species
Azfi_s0251.g060294 No alias not classified & original description: CDS=1-879 0.02 OrthoFinder output from all 47 species
Azfi_s2932.g113765 CRR22 not classified & original description: CDS=1-1710 0.03 OrthoFinder output from all 47 species
Cba_g06451 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06916 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07684 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g07785 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11909 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13329 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g14728 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19714 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20557 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20780 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g27691 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29703 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g31997 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g34865 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g35072 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g68955 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.36G058400.1 Ceric.36G058400 not classified & original description: pacid=50568396... 0.02 OrthoFinder output from all 47 species
Dac_g03990 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g19077 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g28151 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g33128 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43258 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g46003 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g11021 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g12346 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12787 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g36401 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g02296 SLO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02935 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g17941 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21802 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21846 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22610 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009974001 No alias Pentatricopeptide repeat-containing protein At3g26540... 0.02 OrthoFinder output from all 47 species
GSVIVT01033906001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
GSVIVT01036757001 OTP84 Pentatricopeptide repeat-containing protein At1g20230... 0.03 OrthoFinder output from all 47 species
Gb_33439 REME1 Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
LOC_Os07g46770.1 LOC_Os07g46770 Pentatricopeptide repeat-containing protein At4g21065... 0.04 OrthoFinder output from all 47 species
LOC_Os11g17530.2 LOC_Os11g17530 Pentatricopeptide repeat-containing protein At2g37320... 0.02 OrthoFinder output from all 47 species
Len_g04230 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04783 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04787 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g12704 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g37832 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g44140 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54960 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g57360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_9463538g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.02 OrthoFinder output from all 47 species
Msp_g14972 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17407 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17699 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g28222 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28692 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g45902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05468 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g07147 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11260 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g16043 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19073 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19164 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g41058 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33905 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g03328 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12824 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g14457 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63846 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g07598 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g18774 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06851 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08832 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10348 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g11526 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15048 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29583 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g43666 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g52857 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g57818 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001817 No alias not classified & original description: CDS=1-3483 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009200 OTP82 not classified & original description: CDS=343-1080 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0111.g020713 No alias not classified & original description: CDS=1-3843 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0117.g021137 No alias ssDNA-binding protein *(OSB) & original description: CDS=1-933 0.03 OrthoFinder output from all 47 species
Sam_g13764 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g28859 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g114010.3.1 Solyc03g114010 Pentatricopeptide repeat-containing protein At2g29760,... 0.02 OrthoFinder output from all 47 species
Solyc06g048900.1.1 Solyc06g048900 Pentatricopeptide repeat-containing protein At2g40720... 0.03 OrthoFinder output from all 47 species
Spa_g15290 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04113 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g05368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06491 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14539 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g16797 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g24074 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g25192 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g29962 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44203 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e026664_P002 Zm00001e026664 RNA editing factor (BLX) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004730 pseudouridylate synthase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 414 459
IPR002885 Pentatricopeptide_repeat 315 362
IPR002885 Pentatricopeptide_repeat 213 261
IPR002885 Pentatricopeptide_repeat 513 561
IPR002885 Pentatricopeptide_repeat 616 662
IPR002885 Pentatricopeptide_repeat 113 160
IPR002885 Pentatricopeptide_repeat 687 711
IPR002885 Pentatricopeptide_repeat 280 312
IPR046848 E_motif 730 780
No external refs found!