Dcu_g17220


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g17220
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00035580 No alias Pentatricopeptide repeat-containing protein At5g44230... 0.04 OrthoFinder output from all 47 species
Adi_g036755 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036845 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g043352 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067784 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g068879 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g078836 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g081057 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g082454 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g087178 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g100823 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g101336 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g32661 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g42368 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g12581 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g18876 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05762 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07482 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12675 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19283 CRR2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g23735 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26288 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30299 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g31156 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g47303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54960 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g58397 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g08806 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09162 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28534 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g30728 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g35630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68744.t1 Aspi01Gene68744 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0151.g053374 No alias ssDNA-binding protein *(OSB) & original description: CDS=217-2670 0.04 OrthoFinder output from all 47 species
Azfi_s0190.g056908 No alias not classified & original description: CDS=47-3490 0.04 OrthoFinder output from all 47 species
Azfi_s0257.g060586 No alias not classified & original description: CDS=1-3168 0.03 OrthoFinder output from all 47 species
Cba_g04014 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04039 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05270 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05567 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07168 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07721 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g11909 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g20419 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20483 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g20561 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20659 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20832 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g21823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g23772 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g34546 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g35045 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g46020 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67033 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g67793 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g69270 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g75350 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g75407 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g78717 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.10G014900.1 Ceric.10G014900 not classified & original description: pacid=50613343... 0.03 OrthoFinder output from all 47 species
Dcu_g04808 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g05677 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g05747 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g05782 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g06413 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g06479 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g06799 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g07034 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g07051 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g07656 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g07738 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08084 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08274 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g08554 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08566 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08911 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g08949 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g11917 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16581 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g16664 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g16673 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g16955 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17197 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17233 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17299 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g21323 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g23638 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g24237 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g26239 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g26819 OTP82 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g26847 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g35980 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g36077 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g36078 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g36344 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g36645 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g37654 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g38407 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g40681 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g40950 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g42218 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g43193 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g44865 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g45746 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g45918 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g45938 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g45946 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g47669 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g49215 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g50144 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g50973 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g51572 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01033389001 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
LOC_Os01g62910.1 CRR2, LOC_Os01g62910 Pentatricopeptide repeat-containing protein At3g46790,... 0.03 OrthoFinder output from all 47 species
LOC_Os03g44210.2 LOC_Os03g44210 RNA editing factor (SEL1/PDM1) 0.03 OrthoFinder output from all 47 species
LOC_Os11g01836.1 LOC_Os11g01836 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Len_g04841 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g44370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g47516 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_31170g0010 CRR22 RNA editing factor (MEF19) 0.02 OrthoFinder output from all 47 species
MA_615077g0010 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.03 OrthoFinder output from all 47 species
MA_71104g0010 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.03 OrthoFinder output from all 47 species
Msp_g33983 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01159 SLO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04397 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19044 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g21730 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08941 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g12697 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17481 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19928 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g20793 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g43621 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63499 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g02677 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32654 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53972 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g06558 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07135 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g14278 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17279 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27930 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo94907 CRR2 Pentatricopeptide repeat-containing protein At3g46790,... 0.02 OrthoFinder output from all 47 species
Solyc03g006990.1.1 Solyc03g006990 Pentatricopeptide repeat-containing protein At5g66520... 0.04 OrthoFinder output from all 47 species
Solyc04g076800.3.1 CRR22, Solyc04g076800 Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Solyc06g066080.1.1 OTP85, Solyc06g066080 Pentatricopeptide repeat-containing protein At4g21065... 0.03 OrthoFinder output from all 47 species
Solyc07g065730.1.1 Solyc07g065730 Pentatricopeptide repeat-containing protein At5g66520... 0.04 OrthoFinder output from all 47 species
Solyc09g082450.1.1 Solyc09g082450 RNA editing factor (YS1) 0.03 OrthoFinder output from all 47 species
Spa_g18869 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g11463 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e012422_P001 OSB1, Zm00001e012422 ssDNA-binding protein (OSB) 0.02 OrthoFinder output from all 47 species
Zm00001e015440_P001 CRR22, Zm00001e015440 Pentatricopeptide repeat-containing protein At3g57430,... 0.04 OrthoFinder output from all 47 species
Zm00001e020442_P001 Zm00001e020442 Pentatricopeptide repeat-containing protein At4g21300... 0.03 OrthoFinder output from all 47 species
Zm00001e041048_P001 OTP86, Zm00001e041048 RNA editing factor (OTP86) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 201 222
IPR002885 Pentatricopeptide_repeat 98 120
IPR002885 Pentatricopeptide_repeat 123 170
IPR002885 Pentatricopeptide_repeat 21 68
No external refs found!