Aliases : EMB2758
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00170p00032020 | OTP86,... | Pentatricopeptide repeat-containing protein At5g16860... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G15510 | VAC1, ECB2, ATECB2 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g014831 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g024583 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g12986 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g16641 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g21477 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g23642 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g33956 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g06360 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g06797 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g18668 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g18775 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g58851 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g08409 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g19954 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g23679 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g39230 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g19907 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g31382 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g33342 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g76849 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g77304 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.05G079500.1 | Ceric.05G079500 | not classified & original description: pacid=50579193... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.06G074600.1 | Ceric.06G074600 | not classified & original description: pacid=50619733... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.11G093500.1 | VAC1, ECB2,... | not classified & original description: pacid=50595637... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.13G057700.1 | Ceric.13G057700 | not classified & original description: pacid=50635307... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.28G027300.1 | CRR22, Ceric.28G027300 | not classified & original description: pacid=50569783... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.36G022000.1 | Ceric.36G022000 | not classified & original description: pacid=50568812... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g18764 | CRR2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g43638 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g44030 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g08698 | EMB2744 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g38628 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g39981 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g06719 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g43420.1 | OSB1, LOC_Os03g43420 | ssDNA-binding protein (OSB) | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g06634 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g06730 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07121 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07719 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07745 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_77675g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g05630 | EMB2758 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g21545 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g31791 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g41395 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g46446 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g25474 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g27949 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g28135 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g23526 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g33905 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g02824 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g10363 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g12561 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g13598 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g14849 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g16554 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g57955 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g63612 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g04533 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g05156 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g33616 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g37508 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g097670.4.1 | EMB2261, Solyc01g097670 | RNA editing factor (ECD1) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g006990.1.1 | Solyc03g006990 | Pentatricopeptide repeat-containing protein At5g66520... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g005170.3.1 | Solyc07g005170 | Pentatricopeptide repeat-containing protein At1g09410,... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g17148 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004618 | phosphoglycerate kinase activity | IEP | HCCA |
| CC | GO:0005667 | transcription regulator complex | IEP | HCCA |
| CC | GO:0005669 | transcription factor TFIID complex | IEP | HCCA |
| BP | GO:0006090 | pyruvate metabolic process | IEP | HCCA |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | HCCA |
| BP | GO:0006096 | glycolytic process | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006163 | purine nucleotide metabolic process | IEP | HCCA |
| BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | HCCA |
| BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
| BP | GO:0006367 | transcription initiation at RNA polymerase II promoter | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006757 | ATP generation from ADP | IEP | HCCA |
| BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009259 | ribonucleotide metabolic process | IEP | HCCA |
| MF | GO:0009975 | cyclase activity | IEP | HCCA |
| MF | GO:0009976 | tocopherol cyclase activity | IEP | HCCA |
| BP | GO:0016052 | carbohydrate catabolic process | IEP | HCCA |
| MF | GO:0016774 | phosphotransferase activity, carboxyl group as acceptor | IEP | HCCA |
| BP | GO:0019693 | ribose phosphate metabolic process | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | HCCA |
| BP | GO:0046031 | ADP metabolic process | IEP | HCCA |
| BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0046939 | nucleotide phosphorylation | IEP | HCCA |
| BP | GO:0072521 | purine-containing compound metabolic process | IEP | HCCA |
| CC | GO:0090575 | RNA polymerase II transcription regulator complex | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 124 | 170 |
| IPR002885 | Pentatricopeptide_repeat | 22 | 68 |
| IPR002885 | Pentatricopeptide_repeat | 327 | 374 |
| IPR002885 | Pentatricopeptide_repeat | 226 | 272 |
| IPR002885 | Pentatricopeptide_repeat | 98 | 121 |
| IPR002885 | Pentatricopeptide_repeat | 302 | 325 |
| IPR002885 | Pentatricopeptide_repeat | 200 | 222 |
| IPR002885 | Pentatricopeptide_repeat | 395 | 426 |
| No external refs found! |
