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  5. Dcu_g17302

Dcu_g17302


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g17302
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00080380 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g59720,... 0.03 OrthoFinder output from all 47 species
Ala_g16739 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05139 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g05758 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06396 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07482 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09502 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g15903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18804 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19262 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g20750 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g24106 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g29503 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30841 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33170 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g54966 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55233 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g57869 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27921 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g28242 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g37980 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03817 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31313 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0038.g026245 No alias not classified & original description: CDS=1-4080 0.03 OrthoFinder output from all 47 species
Cba_g05972 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07757 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g20706 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g34765 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g36659 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g44516 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g60651 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67737 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.34G047900.1 Ceric.34G047900 not classified & original description: pacid=50622720... 0.04 OrthoFinder output from all 47 species
Dcu_g04808 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g06448 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g06473 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07457 REME1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g07701 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08084 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08305 OTP86 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g17233 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g17291 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g50973 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g11471 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g13294 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01030836001 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
MA_597g0020 DOT4 Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
Msp_g06933 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g12697 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20793 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g43621 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo119202 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Spa_g07598 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06083 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g11783 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g23008 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g39845 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 400 448
IPR002885 Pentatricopeptide_repeat 299 346
IPR002885 Pentatricopeptide_repeat 501 549
IPR002885 Pentatricopeptide_repeat 577 599
IPR002885 Pentatricopeptide_repeat 273 298
IPR046848 E_motif 620 682
IPR033443 PPR_long 96 236
No external refs found!