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  5. Dcu_g17565

Dcu_g17565 (PMIT1, NRAMP1, ATNRAMP1)


Aliases : PMIT1, NRAMP1, ATNRAMP1

Description : metal cation transporter *(NRAMP) & original description: none


Gene families : OG0000603 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000603_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g17565

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00132440 NRAMP6,... Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
Adi_g059631 NRAMP6, ATNRAMP6 metal cation transporter *(NRAMP) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g10005 NRAMP6, ATNRAMP6 metal cation transporter *(NRAMP) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g18301 PMIT1, NRAMP1, ATNRAMP1 metal cation transporter *(NRAMP) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007529 PMIT1, NRAMP1, ATNRAMP1 metal cation transporter *(NRAMP) & original... 0.07 OrthoFinder output from all 47 species
Azfi_s0003.g007921 ATNRAMP4, NRAMP4 metal cation transporter *(NRAMP) & original... 0.02 OrthoFinder output from all 47 species
Ceric.39G032100.1 ATNRAMP4,... metal cation transporter *(NRAMP) & original... 0.04 OrthoFinder output from all 47 species
Dde_g07386 NRAMP6, ATNRAMP6 metal cation transporter *(NRAMP) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_08087 NRAMP6, ATNRAMP6 metal cation transporter (NRAMP) 0.03 OrthoFinder output from all 47 species
Gb_30457 ATNRAMP3, NRAMP3 metal cation transporter (NRAMP) 0.02 OrthoFinder output from all 47 species
Gb_39414 PMIT1, NRAMP1, ATNRAMP1 metal cation transporter (NRAMP) 0.03 OrthoFinder output from all 47 species
MA_10430859g0010 NRAMP6, ATNRAMP6 metal cation transporter (NRAMP) 0.06 OrthoFinder output from all 47 species
MA_884894g0010 NRAMP6, ATNRAMP6 Metal transporter Nramp5 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
Mp4g07480.1 ATNRAMP4, NRAMP4 metal cation transporter (NRAMP) 0.02 OrthoFinder output from all 47 species
Ore_g27197 NRAMP6, ATNRAMP6 metal cation transporter *(NRAMP) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15087 PMIT1, NRAMP1, ATNRAMP1 metal cation transporter *(NRAMP) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g00739 ATNRAMP4, NRAMP4 metal cation transporter *(NRAMP) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55045 PMIT1, NRAMP1, ATNRAMP1 metal cation transporter *(NRAMP) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc11g018530.2.1 PMIT1, NRAMP1,... metal cation transporter (NRAMP) 0.04 OrthoFinder output from all 47 species
Tin_g16965 ATNRAMP3, NRAMP3 metal cation transporter *(NRAMP) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e011161_P002 PMIT1, NRAMP1,... metal cation transporter (NRAMP) 0.03 OrthoFinder output from all 47 species
Zm00001e012980_P001 PMIT1, NRAMP1,... metal cation transporter (NRAMP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0030001 metal ion transport IEA Interproscan
MF GO:0046873 metal ion transmembrane transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
InterPro domains Description Start Stop
IPR001046 NRAMP_fam 110 472
No external refs found!