Description : component *(uL5c) of large plastid ribosomal-subunit proteome & original description: none
Gene families : OG0007287 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007287_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Dcu_g18361 | |
| Cluster | HCCA: Cluster_59 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00259120 | evm_27.TU.AmTr_v1... | Protein biosynthesis.organelle translation... | 0.03 | OrthoFinder output from all 47 species | |
| AT4G01310 | No alias | Ribosomal L5P family protein | 0.07 | OrthoFinder output from all 47 species | |
| Aev_g08868 | No alias | component *(uL5c) of large plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g07051 | No alias | component *(uL5c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g00607 | No alias | component *(uL5c) of large plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g01084 | No alias | component *(uL5c) of large plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
| Aspi01Gene03150.t1 | Aspi01Gene03150 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0114.g046128 | No alias | component *(uL5c) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g03728 | No alias | component *(uL5c) of large plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.16G001900.1 | Ceric.16G001900 | component *(uL5c) of large plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g06048 | No alias | component *(uL5c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g04389 | No alias | component *(uL5c) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01027006001 | No alias | Protein biosynthesis.organelle translation... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_03076 | No alias | component psRPL5 of large ribosomal subunit proteome | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g03360.1 | LOC_Os03g03360 | component psRPL5 of large ribosomal subunit proteome | 0.07 | OrthoFinder output from all 47 species | |
| Lfl_g01005 | No alias | component *(uL5c) of large plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
| MA_8012412g0010 | No alias | 50S ribosomal protein L5, chloroplastic OS=Spinacia... | 0.02 | OrthoFinder output from all 47 species | |
| Mp1g19970.1 | No alias | component psRPL5 of large ribosomal subunit proteome | 0.06 | OrthoFinder output from all 47 species | |
| Nbi_g00386 | No alias | component *(uL5c) of large plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g17964 | No alias | component *(uL5c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g10124 | No alias | component *(uL5c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g03610 | No alias | component *(uL5c) of large plastid ribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0125.g021655 | No alias | component *(uL5c) of large plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g35847 | No alias | component *(uL5c) of large plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Smo6364 | No alias | Protein biosynthesis.organelle translation... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g04808 | No alias | component *(uL5c) of large plastid ribosomal-subunit... | 0.07 | OrthoFinder output from all 47 species | |
| Tin_g10891 | No alias | component *(uL5c) of large plastid ribosomal-subunit... | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e000182_P001 | Zm00001e000182 | component psRPL5 of large ribosomal subunit proteome | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0004820 | glycine-tRNA ligase activity | IEP | HCCA |
| MF | GO:0004853 | uroporphyrinogen decarboxylase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005525 | GTP binding | IEP | HCCA |
| CC | GO:0005737 | cytoplasm | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006426 | glycyl-tRNA aminoacylation | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| MF | GO:0010277 | chlorophyllide a oxygenase [overall] activity | IEP | HCCA |
| MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | HCCA |
| MF | GO:0016703 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) | IEP | HCCA |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
| MF | GO:0016831 | carboxy-lyase activity | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | HCCA |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| No external refs found! |
