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  5. Dcu_g18710

Dcu_g18710


Description : component *(eS30) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0002477 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002477_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g18710
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
Aob_g38889 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Azfi_s0068.g036442 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Cba_g69506 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.07 OrthoFinder output from all 47 species
Ceric.20G020400.1 Ceric.20G020400 component *(eS30) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001003.33 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
Cre16.g666301 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
Ehy_g30289 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Gb_16784 No alias component RPS30 of SSU proteome 0.04 OrthoFinder output from all 47 species
Gb_23464 No alias component RPS30 of SSU proteome 0.02 OrthoFinder output from all 47 species
Len_g35390 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Mp2g24290.1 No alias component RPS30 of SSU proteome 0.02 OrthoFinder output from all 47 species
Sam_g05835 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g35687 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Sam_g37139 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.08 OrthoFinder output from all 47 species
Sam_g45897 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Sam_g52915 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Solyc08g076340.3.1 Solyc08g076340 component RPS30 of SSU proteome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 4 71
IPR006846 Ribosomal_S30 76 133
No external refs found!