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  5. Dcu_g18822

Dcu_g18822


Description : not classified & original description: none


Gene families : OG0001367 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001367_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g18822

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00129060 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Aev_g16127 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34497.t1 Aspi01Gene34497 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.17G060100.1 Ceric.17G060100 not classified & original description: pacid=50617754... 0.05 OrthoFinder output from all 47 species
Ceric.1Z159800.1 Ceric.1Z159800 not classified & original description: pacid=50567680... 0.04 OrthoFinder output from all 47 species
Ceric.1Z159900.1 Ceric.1Z159900 not classified & original description: pacid=50567683... 0.04 OrthoFinder output from all 47 species
Ceric.1Z166900.1 Ceric.1Z166900 not classified & original description: pacid=50632887... 0.04 OrthoFinder output from all 47 species
Dac_g26357 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g20132 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01012688001 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01012691001 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Mp5g01090.1 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e024925_P001 Zm00001e024925 Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004126 cytidine deaminase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006213 pyrimidine nucleoside metabolic process IEP HCCA
BP GO:0006216 cytidine catabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009116 nucleoside metabolic process IEP HCCA
BP GO:0009119 ribonucleoside metabolic process IEP HCCA
BP GO:0009164 nucleoside catabolic process IEP HCCA
BP GO:0009972 cytidine deamination IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP HCCA
MF GO:0019239 deaminase activity IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP HCCA
BP GO:0042454 ribonucleoside catabolic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046087 cytidine metabolic process IEP HCCA
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP HCCA
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP HCCA
BP GO:0046135 pyrimidine nucleoside catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072529 pyrimidine-containing compound catabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
BP GO:1901658 glycosyl compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR027949 Chloroplast_duf 114 389
No external refs found!