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  5. Dcu_g19480

Dcu_g19480 (ATSS4, SS4, SSIV)


Aliases : ATSS4, SS4, SSIV

Description : not classified & original description: none


Gene families : OG0000693 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000693_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g19480
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Aev_g25563 ATSS4, SS4, SSIV not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene32631.t1 ATSS3, SS3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43821.t1 ATSS4, SS4,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0001.g000667 ATSS4, SS4, SSIV not classified & original description: CDS=177-2066 0.04 OrthoFinder output from all 47 species
Ehy_g20658 ATSS4, SS4, SSIV starch synthase *(SS4) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g34784 ATSS3, SS3 starch synthase *(SS3) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g13857 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0222.g026242 ATSS3, SS3 starch synthase *(SS3) & original description: CDS=271-2166 0.05 OrthoFinder output from all 47 species
Spa_g10545 ATSS3, SS3 starch synthase *(SS3) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016757 glycosyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013534 Starch_synth_cat_dom 157 385
IPR001296 Glyco_trans_1 461 613
No external refs found!