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  5. Dcu_g19878

Dcu_g19878


Description : not classified & original description: none


Gene families : OG0001019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001019_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g19878
Cluster HCCA: Cluster_174

Target Alias Description ECC score Gene Family Method Actions
Aev_g40836 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26119 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g44986 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g22578 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene10312.t1 Aspi01Gene10312 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0039.g026458 No alias not classified & original description: CDS=1-402 0.03 OrthoFinder output from all 47 species
Dac_g20008 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g01180 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Len_g46111 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17473 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10390025g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp2g00630.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g02360.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp2g09620.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp3g21190.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g09822 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g13410 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g25860 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g29678 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g21607 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g44282 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g37674 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g39636 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g15372 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g29052 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR021851 DUF3455 65 226
IPR021851 DUF3455 280 385
No external refs found!