Aliases : ATH1, ATATH1, ABCA2
Description : subfamily ABCA transporter & original description: none
Gene families : OG0001787 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001787_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Dcu_g20236 | |
| Cluster | HCCA: Cluster_186 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00078p00136690 | ATH1, ATATH1,... | Solute transport.primary active transport.ABC... | 0.02 | OrthoFinder output from all 47 species | |
| AT3G47730 | ATH1, ATATH1, ABCA2 | ATP-binding cassette A2 | 0.02 | OrthoFinder output from all 47 species | |
| AT5G61690 | ATH15, ATATH15 | ABC2 homolog 15 | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g09766 | ATH1, ATATH1, ABCA2 | subfamily ABCA transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene08540.t3 | ATH11, ATATH11,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0022.g016230 | ATH1, ATATH1, ABCA2 | subfamily ABCA transporter & original description: CDS=354-3422 | 0.02 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000057.66 | ATH1, ATATH1, ABCA2 | ABC transporter A family member 2 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Cre03.g151400 | ABCA1, AtABCA1 | Solute transport.primary active transport.ABC... | 0.02 | OrthoFinder output from all 47 species | |
| Mp7g18500.1 | ATH1, ATATH1, ABCA2 | fatty acid transporter (ABCA). subfamily ABCA transporter | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0029.g010133 | ATH1, ATATH1, ABCA2 | not classified & original description: CDS=111-2057 | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g113070.4.1 | ATH1, ATATH1,... | fatty acid transporter (ABCA). subfamily ABCA transporter | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g015970.3.1 | ABCA1, AtABCA1,... | subfamily ABCA transporter | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e004192_P001 | ATH1, ATATH1,... | fatty acid transporter (ABCA). subfamily ABCA transporter | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005524 | ATP binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000155 | phosphorelay sensor kinase activity | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0003993 | acid phosphatase activity | IEP | HCCA |
| MF | GO:0004672 | protein kinase activity | IEP | HCCA |
| MF | GO:0004673 | protein histidine kinase activity | IEP | HCCA |
| BP | GO:0007165 | signal transduction | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
| MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | HCCA |
| MF | GO:0016791 | phosphatase activity | IEP | HCCA |
| MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| MF | GO:0140299 | small molecule sensor activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003439 | ABC_transporter-like_ATP-bd | 568 | 710 |
| No external refs found! |
