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  5. Dcu_g20454

Dcu_g20454 (GNC, GATA21)


Aliases : GNC, GATA21

Description : transcription factor *(A/B-GATA) & original description: none


Gene families : OG0000100 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000100_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g20454
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00074220 GATA4,... RNA biosynthesis.transcriptional activation.C2C2... 0.05 OrthoFinder output from all 47 species
AT3G20750 GATA29 GATA transcription factor 29 0.02 OrthoFinder output from all 47 species
AT3G50870 HAN, MNP, GATA18 GATA type zinc finger transcription factor family protein 0.03 OrthoFinder output from all 47 species
AT3G51080 GATA6 GATA transcription factor 6 0.03 OrthoFinder output from all 47 species
AT4G36240 GATA7 GATA transcription factor 7 0.02 OrthoFinder output from all 47 species
AT5G49300 GATA16 GATA transcription factor 16 0.02 OrthoFinder output from all 47 species
Adi_g010897 GNC, GATA21 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g14443 GNC, GATA21 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g09936 GNC, GATA21 transcription factor *(A/B-GATA) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g09937 GNC, GATA21 transcription factor *(A/B-GATA) & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g05872 GATA22, CGA1, GNL transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12583 GATA9 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene69106.t1 GATA4, Aspi01Gene69106 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15344 GATA15 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01017011001 GATA12 RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
Gb_32966 GATA22, CGA1, GNL transcription factor (GATA) 0.06 OrthoFinder output from all 47 species
LOC_Os02g12790.1 GATA22, CGA1,... transcription factor (GATA) 0.04 OrthoFinder output from all 47 species
Len_g07439 GATA23 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g27263 GATA17 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g08626 GATA22, CGA1, GNL transcription factor *(A/B-GATA) & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g02879 GATA15 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000079 GATA9 transcription factor *(A/B-GATA) & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0063.g015681 GATA12 transcription factor *(A/B-GATA) & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0158.g023789 GATA6 transcription factor *(A/B-GATA) & original description:... 0.02 OrthoFinder output from all 47 species
Sam_g39003 No alias transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g39840 No alias transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Smo440037 GNC, GATA21 RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
Spa_g15671 GATA15 transcription factor *(A/B-GATA) & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e028245_P001 GATA23, Zm00001e028245 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR000679 Znf_GATA 380 413
No external refs found!