Dcu_g21022 (PDR11, ATPDR11)

Aliases : PDR11, ATPDR11

Description : subfamily ABCG transporter & original description: none

Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dcu_g21022
Cluster	HCCA: Cluster_33

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00069p00192990	PDR11, ATPDR11,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Cba_g57880	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.06	OrthoFinder output from all 47 species
GSVIVT01017200001	ABCG40, PDR12,...	Pleiotropic drug resistance protein 1 OS=Nicotiana tabacum	0.02	OrthoFinder output from all 47 species
Mp2g21340.1	ATPDR3, PDR3	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Nbi_g41909	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0006811	monoatomic ion transport	IEP	HCCA
BP	GO:0006820	monoatomic anion transport	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR043926	ABCG_dom	392	445
IPR003439	ABC_transporter-like_ATP-bd	898	1050
IPR013525	ABC_2_trans	513	725
IPR013525	ABC_2_trans	1196	1408
IPR029481	ABC_trans_N	91	152
IPR013581	PDR_assoc	730	796
IPR003439	ABC_transporter-like_ATP-bd	177	359

External Links

No external refs found!