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  5. Dcu_g21230

Dcu_g21230


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g21230
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AT1G15510 VAC1, ECB2, ATECB2 Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G53600 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G68930 No alias pentatricopeptide (PPR) repeat-containing protein 0.02 OrthoFinder output from all 47 species
AT3G46790 CRR2 Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G15720 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G27110 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G61400 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g003806 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g017307 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g075132 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g088362 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g098996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g01931 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g09082 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g09699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13180 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24222 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24235 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g33237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05108 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06995 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07147 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07472 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g10935 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18055 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18062 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18767 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26399 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30201 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30595 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g56508 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g63751 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g09005 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g20865 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g23626 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27000 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27009 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27602 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27880 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28228 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g41844 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02020 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08251 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12947 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16323 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g18280 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18405 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20531 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23948 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28235 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28421 VAC1, ECB2, ATECB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g29262 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene42015.t1 Aspi01Gene42015 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0010.g012368 No alias not classified & original description: CDS=1-2025 0.03 OrthoFinder output from all 47 species
Azfi_s0082.g038688 No alias not classified & original description: CDS=1-3078 0.03 OrthoFinder output from all 47 species
Azfi_s0090.g042774 No alias not classified & original description: CDS=1-2433 0.05 OrthoFinder output from all 47 species
Azfi_s0127.g048709 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2400 0.03 OrthoFinder output from all 47 species
Cba_g29637 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g58787 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G044100.1 RARE1, Ceric.07G044100 not classified & original description: pacid=50626680... 0.05 OrthoFinder output from all 47 species
Ceric.19G064200.1 MEF19, Ceric.19G064200 not classified & original description: pacid=50576611... 0.03 OrthoFinder output from all 47 species
Ceric.23G038700.1 Ceric.23G038700 not classified & original description: pacid=50609782... 0.04 OrthoFinder output from all 47 species
Ceric.38G046100.1 Ceric.38G046100 not classified & original description: pacid=50579564... 0.03 OrthoFinder output from all 47 species
Dac_g15344 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g38008 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08279 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08599 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g21328 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g42088 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g47931 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g49215 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g50973 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03480 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04444 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09654 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10498 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16405 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18062 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g21326 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22354 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24540 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g36355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46744 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01036975001 EMB2758 Pentatricopeptide repeat-containing protein At4g33990... 0.05 OrthoFinder output from all 47 species
LOC_Os01g08120.1 OTP81, LOC_Os01g08120 RNA editing factor (OTP81) 0.03 OrthoFinder output from all 47 species
LOC_Os08g38610.1 LOC_Os08g38610 Pentatricopeptide repeat-containing protein At1g26900,... 0.04 OrthoFinder output from all 47 species
LOC_Os10g34720.1 LOI1, MEF11,... Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
LOC_Os11g17530.2 LOC_Os11g17530 Pentatricopeptide repeat-containing protein At2g37320... 0.03 OrthoFinder output from all 47 species
Len_g05435 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g07742 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g13403 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17579 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18876 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18960 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g25856 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g33773 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g37402 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g38675 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g45180 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54327 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06268 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07755 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19879 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g35187 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_9384g0020 EMB2261 Pentatricopeptide repeat-containing protein At3g49170,... 0.02 OrthoFinder output from all 47 species
Mp5g04990.1 PTAC9, OSB2 ssDNA-binding protein (OSB). TAC9 cofactor of... 0.02 OrthoFinder output from all 47 species
Msp_g28529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45898 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g04988 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g06654 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g18044 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g30055 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g32359 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g38625 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g40774 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g06871 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g08941 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09573 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15077 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g17591 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18691 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20007 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20793 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g23513 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30175 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g32143 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37890 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g40943 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43142 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43620 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12221 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03497 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05896 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g12193 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g55046 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17989 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g21254 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g40724 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo105197 CRR22 Pentatricopeptide repeat-containing protein At3g49710... 0.04 OrthoFinder output from all 47 species
Smo99756 No alias Pentatricopeptide repeat-containing protein At2g39620... 0.03 OrthoFinder output from all 47 species
Spa_g08565 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g12442 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g13906 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14336 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g20093 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23549 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g27928 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g33028 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g44844 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g48112 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53083 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04733 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06527 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g11480 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13065 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14010 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17410 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17629 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19505 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g19923 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g24828 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26639 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g29864 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g35068 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g44074 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g44229 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e007042_P001 Zm00001e007042 RNA editing factor (AEF1) 0.03 OrthoFinder output from all 47 species
Zm00001e028330_P001 PTAC9, OSB2,... ssDNA-binding protein (OSB). TAC9 cofactor of... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006914 autophagy IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007064 mitotic sister chromatid cohesion IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
CC GO:1902554 serine/threonine protein kinase complex IEP HCCA
CC GO:1902911 protein kinase complex IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
CC GO:1990316 Atg1/ULK1 kinase complex IEP HCCA
InterPro domains Description Start Stop
IPR046848 E_motif 863 925
IPR002885 Pentatricopeptide_repeat 316 338
IPR002885 Pentatricopeptide_repeat 244 269
IPR032867 DYW_dom 961 1052
IPR002885 Pentatricopeptide_repeat 543 591
IPR002885 Pentatricopeptide_repeat 746 793
IPR002885 Pentatricopeptide_repeat 443 490
IPR002885 Pentatricopeptide_repeat 342 389
IPR002885 Pentatricopeptide_repeat 645 692
IPR046849 Eplus_motif 930 953
No external refs found!