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  5. Dcu_g21425

Dcu_g21425


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g21425
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00256920 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g21065... 0.03 OrthoFinder output from all 47 species
AMTR_s00022p00023600 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g50270... 0.04 OrthoFinder output from all 47 species
AMTR_s00068p00031610 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Adi_g018868 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g116582 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g18197 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g42174 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g46569 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11078 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Ala_g16762 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g22597 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g25745 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Ala_g30691 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g31168 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g35628 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g36221 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g36228 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36524 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g38819 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g07079 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g50814 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g08429 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07588 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g14024 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g15480 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16323 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g16794 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aop_g16814 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16831 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g20359 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g20887 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g20910 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g21140 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23475 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23935 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g24180 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aop_g28486 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g28527 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g36807 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g39107 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67876 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0119.g046677 CRR2 not classified & original description: CDS=1-1557 0.07 OrthoFinder output from all 47 species
Cba_g06595 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g76621 EMB2758 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ceric.27G000800.1 Ceric.27G000800 not classified & original description: pacid=50605275... 0.06 OrthoFinder output from all 47 species
Dac_g15083 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dac_g30413 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g33215 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g40230 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g16787 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g05762 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g37997 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g03091 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os06g39650.1 LOC_Os06g39650 Pentatricopeptide repeat-containing protein At1g31430... 0.02 OrthoFinder output from all 47 species
LOC_Os09g39970.1 LOC_Os09g39970 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
LOC_Os10g39460.2 LOC_Os10g39460 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Len_g18024 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Len_g57720 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g33995 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g39221 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g41204 No alias ssDNA-binding protein *(OSB) & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g45690 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g46020 MEF22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g03792 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g04999 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g06586 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g07543 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g11803 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g19585 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g23882 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g24911 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g27842 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g28136 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g32016 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g38771 No alias ssDNA-binding protein *(OSB) & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g01899 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g02390 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03043 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g03052 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g13676 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19065 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20201 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g22972 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g23954 No alias ssDNA-binding protein *(OSB) & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g35308 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g40050 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g11273 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g37149 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g64858 REME1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g03152 OTP84 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pnu_g03216 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g04353 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Pnu_g15155 REME1 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Pnu_g15731 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g25475 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g30637 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g30997 OTP84 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g05273 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05733 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06693 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g07605 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09778 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g11012 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g17508 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g23589 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g33573 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39244 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g48708 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53366 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g56225 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g59316 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002406 OSB1 ssDNA-binding protein *(OSB) & original description: CDS=1-324 0.05 OrthoFinder output from all 47 species
Sam_g11237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g33428 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo125795 REME1 Pentatricopeptide repeat-containing protein At2g13600... 0.14 OrthoFinder output from all 47 species
Smo126075 No alias Pentatricopeptide repeat-containing protein At4g30700... 0.05 OrthoFinder output from all 47 species
Smo127736 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Spa_g17686 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g18513 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g20273 LPA66 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g25220 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g32601 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g32773 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g33897 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g39685 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53472 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g03535 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g07829 CRR2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g17298 VAC1, ECB2, ATECB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g17737 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g17746 OTP84 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g22809 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g23085 No alias ssDNA-binding protein *(OSB) & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e039026_P001 OTP82, Zm00001e039026 Pentatricopeptide repeat-containing protein At5g48910... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005244 voltage-gated monoatomic ion channel activity IEP HCCA
MF GO:0005247 voltage-gated chloride channel activity IEP HCCA
MF GO:0005253 monoatomic anion channel activity IEP HCCA
MF GO:0005254 chloride channel activity IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0006821 chloride transport IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008308 voltage-gated monoatomic anion channel activity IEP HCCA
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015108 chloride transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 50 73
IPR002885 Pentatricopeptide_repeat 1 47
IPR046848 E_motif 92 123
No external refs found!