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  5. Dcu_g23963

Dcu_g23963 (OTP82)


Aliases : OTP82

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g23963
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AT1G25360 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g06320 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18046 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g21001 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g32785 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g22607 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g06415 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07370 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g07454 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g13524 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15385 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18060 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18512 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18775 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g19136 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20449 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g27512 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g30837 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g32098 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32399 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g40210 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g54953 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g58582 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g61738 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g18330 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g31401 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g70598 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05214 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ceric.10G015400.1 CRR22, Ceric.10G015400 not classified & original description: pacid=50611867... 0.05 OrthoFinder output from all 47 species
Ceric.13G011700.1 Ceric.13G011700 not classified & original description: pacid=50636754... 0.07 OrthoFinder output from all 47 species
Ceric.19G004000.1 CRR2, Ceric.19G004000 not classified & original description: pacid=50575630... 0.05 OrthoFinder output from all 47 species
Ceric.23G038700.1 Ceric.23G038700 not classified & original description: pacid=50609782... 0.04 OrthoFinder output from all 47 species
Ceric.30G017300.1 Ceric.30G017300 not classified & original description: pacid=50608904... 0.04 OrthoFinder output from all 47 species
Ehy_g12147 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12271 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01031733001 EMB2758 Pentatricopeptide repeat-containing protein At4g33990... 0.03 OrthoFinder output from all 47 species
LOC_Os03g63260.3 LOC_Os03g63260 Putative pentatricopeptide repeat-containing protein... 0.06 OrthoFinder output from all 47 species
LOC_Os03g64370.1 LOC_Os03g64370 Pentatricopeptide repeat-containing protein At5g52850,... 0.03 OrthoFinder output from all 47 species
LOC_Os04g35610.1 LOC_Os04g35610 RNA editing factor (SLO2) 0.03 OrthoFinder output from all 47 species
LOC_Os08g05750.1 LOC_Os08g05750 Pentatricopeptide repeat-containing protein At4g16835,... 0.03 OrthoFinder output from all 47 species
MA_11517g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
MA_136498g0010 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
MA_656915g0010 CRR22 Pentatricopeptide repeat-containing protein DOT4,... 0.02 OrthoFinder output from all 47 species
Mp5g04990.1 PTAC9, OSB2 ssDNA-binding protein (OSB). TAC9 cofactor of... 0.03 OrthoFinder output from all 47 species
Nbi_g06785 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g10571 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g32191 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g53286 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008533 No alias not classified & original description: CDS=1-2436 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009200 OTP82 not classified & original description: CDS=343-1080 0.05 OrthoFinder output from all 47 species
Sam_g09876 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo81279 EMB2261 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Solyc01g098480.3.1 Solyc01g098480 Pentatricopeptide repeat-containing protein At2g21090... 0.03 OrthoFinder output from all 47 species
Solyc01g110010.3.1 Solyc01g110010 Pentatricopeptide repeat-containing protein At1g74600,... 0.03 OrthoFinder output from all 47 species
Solyc02g082160.2.1 CRR22, Solyc02g082160 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Tin_g35668 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g39845 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g45488 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e015695_P001 Zm00001e015695 Pentatricopeptide repeat-containing protein At4g16835,... 0.02 OrthoFinder output from all 47 species
Zm00001e020567_P001 Zm00001e020567 RNA editing factor (MEF7) 0.02 OrthoFinder output from all 47 species
Zm00001e022858_P001 Zm00001e022858 Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
Zm00001e035419_P001 Zm00001e035419 Pentatricopeptide repeat-containing protein At1g25360... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
InterPro domains Description Start Stop
IPR046848 E_motif 136 198
IPR002885 Pentatricopeptide_repeat 21 69
IPR002885 Pentatricopeptide_repeat 2 19
IPR002885 Pentatricopeptide_repeat 97 120
IPR032867 DYW_dom 231 287
No external refs found!