Dcu_g25009 (RAP2.2)

Aliases : RAP2.2

Description : transcription factor component *(HRE/RAP2.12) of oxygen-sensor activity & original description: none

Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dcu_g25009
Cluster	HCCA: Cluster_132

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00107p00095070	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	OrthoFinder output from all 47 species
AT5G13910	LEP	Integrase-type DNA-binding superfamily protein	0.02	OrthoFinder output from all 47 species
AT5G19790	RAP2.11	related to AP2 11	0.02	OrthoFinder output from all 47 species
Aev_g40001	No alias	cutin and suberin biosynthesis transcription factor...	0.03	OrthoFinder output from all 47 species
Als_g05905	No alias	subgroup ERF-III transcription factor & original...	0.03	OrthoFinder output from all 47 species
Als_g38843	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g45961	HRE2	transcription factor component *(HRE/RAP2.12) of...	0.03	OrthoFinder output from all 47 species
Aob_g03264	No alias	subgroup ERF-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g04287	RAP2.12	transcription factor component *(HRE/RAP2.12) of...	0.03	OrthoFinder output from all 47 species
Aop_g38999	ORA47	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene29234.t1	Rap2.6L, Aspi01Gene29234	subgroup ERF-X transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.05G034500.1	DEAR2, Ceric.05G034500	not classified & original description: pacid=50578330...	0.03	OrthoFinder output from all 47 species
GSVIVT01017315001	WIN1, SHN1	Cell wall.cutin and suberin.biosynthesis...	0.03	OrthoFinder output from all 47 species
LOC_Os02g32040.1	LOC_Os02g32040	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
LOC_Os04g46400.1	LOC_Os04g46400	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
Solyc04g078640.3.1	DEAR2, Solyc04g078640	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
Solyc08g066660.1.1	TINY2, Solyc08g066660	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
Tin_g13895	CRF3	subgroup ERF-VI transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g37278	Rap2.6L	subgroup ERF-X transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e036130_P001	RAP2.4, Zm00001e036130	transcription factor (DREB)	0.01	OrthoFinder output from all 47 species
Zm00001e040879_P001	ERF110, Zm00001e040879	Ethylene-responsive transcription factor RAP2-6...	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
BP	GO:0019941	modification-dependent protein catabolic process	IEP	HCCA
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0044265	cellular macromolecule catabolic process	IEP	HCCA
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	HCCA
BP	GO:1901575	organic substance catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	129	177

External Links

No external refs found!

Dcu_g25009 (RAP2.2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation