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  5. Dcu_g25878

Dcu_g25878


Description : LRR-domain extensin & original description: none


Gene families : OG0000448 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000448_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g25878
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00231840 evm_27.TU.AmTr_v1... Leucine-rich repeat extensin-like protein 2... 0.02 OrthoFinder output from all 47 species
AMTR_s00056p00176290 evm_27.TU.AmTr_v1... Leucine-rich repeat extensin-like protein 3... 0.02 OrthoFinder output from all 47 species
AMTR_s00160p00027170 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
AT3G22800 No alias Leucine-rich repeat (LRR) family protein 0.03 OrthoFinder output from all 47 species
AT4G06744 No alias Leucine-rich repeat (LRR) family protein 0.04 OrthoFinder output from all 47 species
AT4G28380 No alias Leucine-rich repeat (LRR) family protein 0.02 OrthoFinder output from all 47 species
Aev_g37061 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03749 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g05958 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene09207.t1 Aspi01Gene09207 LRR-domain extensin & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene59063.t1 Aspi01Gene59063 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0114.g046029 No alias LRR-domain extensin & original description: CDS=1-1872 0.04 OrthoFinder output from all 47 species
Ceric.17G055900.1 Ceric.17G055900 LRR-domain extensin & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.24G073600.1 LRX2, Ceric.24G073600 LRR-domain extensin & original description:... 0.03 OrthoFinder output from all 47 species
Ehy_g31890 LRX2 LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01020574001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
GSVIVT01031702001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os02g04540.1 LRX1, LOC_Os02g04540 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
LOC_Os04g42620.1 LOC_Os04g42620 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os07g07990.1 LOC_Os07g07990 LRR-domain extensin 0.04 OrthoFinder output from all 47 species
Len_g28005 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Mp2g25390.1 No alias Leucine-rich repeat extensin-like protein 4... 0.02 OrthoFinder output from all 47 species
Ore_g40535 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g053840.1.1 Solyc07g053840 LRR-domain extensin 0.04 OrthoFinder output from all 47 species
Solyc09g082530.3.1 Solyc09g082530 LRR-domain extensin 0.02 OrthoFinder output from all 47 species
Solyc11g005150.3.1 LRX2, Solyc11g005150 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
Solyc12g006980.2.1 Solyc12g006980 LRR-domain extensin 0.05 OrthoFinder output from all 47 species
Spa_g01730 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e011874_P001 Zm00001e011874 LRR-domain extensin 0.02 OrthoFinder output from all 47 species
Zm00001e025924_P001 LRX2, Zm00001e025924 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
Zm00001e026840_P001 Zm00001e026840 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
Zm00001e030216_P001 LRX2, Zm00001e030216 LRR-domain extensin 0.04 OrthoFinder output from all 47 species
Zm00001e031241_P001 Zm00001e031241 LRR-domain extensin 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0016020 membrane IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 41 74
No external refs found!