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  5. Dcu_g25960

Dcu_g25960


Description : not classified & original description: none


Gene families : OG0000033 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g25960
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00110p00020470 ATGER3, GLP3B,... Germin-like protein subfamily 3 member 3 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
AMTR_s02363p00003720 GLP10,... Germin-like protein 9-3 OS=Oryza sativa subsp. japonica 0.01 OrthoFinder output from all 47 species
AT3G05930 GLP8 germin-like protein 8 0.02 OrthoFinder output from all 47 species
Aev_g36566 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g36874 GLP4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g39612 GLP10 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g28788 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g35233 GLP5 not classified & original description: none 0.11 OrthoFinder output from all 47 species
Aspi01Gene01605.t1 GLP10, Aspi01Gene01605 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene41469.t1 GLP10, Aspi01Gene41469 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene41471.t1 GLP10, Aspi01Gene41471 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene41473.t1 GLP10, Aspi01Gene41473 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene41474.t1 GLP10, Aspi01Gene41474 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene41475.t1 GLP10, Aspi01Gene41475 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene41483.t1 GLP10, Aspi01Gene41483 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene47742.t1 GLP10, Aspi01Gene47742 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene47746.t1 GLP10, Aspi01Gene47746 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene47751.t1 GLP10, Aspi01Gene47751 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene47772.t1 GLP10, Aspi01Gene47772 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene47774.t1 GLP10, Aspi01Gene47774 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene49300.t1 GLP10, Aspi01Gene49300 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0226.g058974 No alias not classified & original description: CDS=1-636 0.03 OrthoFinder output from all 47 species
Cba_g73190 GLP10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.1Z074600.1 GLP10, Ceric.1Z074600 not classified & original description: pacid=50634953... 0.06 OrthoFinder output from all 47 species
Ceric.1Z075100.1 GLP10, Ceric.1Z075100 not classified & original description: pacid=50634959... 0.03 OrthoFinder output from all 47 species
Ceric.20G091200.1 GLP10, Ceric.20G091200 not classified & original description: pacid=50566125... 0.03 OrthoFinder output from all 47 species
Dcu_g42762 GLP5 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g24439 GLP5 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g28953 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g25774 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os04g22080.1 ATGER1, GER1,... Germin-like protein 8-14 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
LOC_Os08g08980.1 LOC_Os08g08980 Germin-like protein 8-4 OS=Oryza sativa subsp. japonica... 0.01 OrthoFinder output from all 47 species
MA_78360g0010 GLP5 Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana... 0.02 OrthoFinder output from all 47 species
MA_90487g0010 No alias Germin-like protein 3-8 OS=Oryza sativa subsp. japonica... 0.01 OrthoFinder output from all 47 species
Mp5g00710.1 No alias Germin-like protein 9-1 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Mp5g00720.1 GL22 Germin-like protein subfamily 2 member 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp5g00890.1 GLP10 Germin-like protein 9-3 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Mp5g00940.1 GLP10 Germin-like protein 9-3 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Mp5g00960.1 GLP10 Germin-like protein 9-3 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Mp5g00990.1 GLP10 Germin-like protein 9-3 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Mp5g02540.1 GLP4 Germin-like protein 3-3 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Mp8g10470.1 No alias Germin-like protein 9-3 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Ore_g27913 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35094 GLP4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43303 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g15450 GLP5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g34054 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03615 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Smo229376 No alias Germin-like protein 1-3 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
Zm00001e013714_P001 Zm00001e013714 Putative germin-like protein 2-1 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006045 Cupin_1 71 190
No external refs found!