Dcu_g28278


Description : not classified & original description: none


Gene families : OG0000662 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000662_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g28278

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00129830 evm_27.TU.AmTr_v1... Clavaminate synthase-like protein At3g21360... 0.01 OrthoFinder output from all 47 species
AMTR_s00071p00130010 evm_27.TU.AmTr_v1... No description available 0.01 OrthoFinder output from all 47 species
AMTR_s00071p00133060 evm_27.TU.AmTr_v1... Clavaminate synthase-like protein At3g21360... 0.01 OrthoFinder output from all 47 species
AMTR_s00071p00133840 evm_27.TU.AmTr_v1... Clavaminate synthase-like protein At3g21360... 0.01 OrthoFinder output from all 47 species
Als_g51756 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g19934 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g68622 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g14053 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01016978001 No alias Clavaminate synthase-like protein At3g21360... 0.02 OrthoFinder output from all 47 species
Gb_34217 No alias Clavaminate synthase-like protein At3g21360... 0.02 OrthoFinder output from all 47 species
LOC_Os08g29510.1 LOC_Os08g29510 Clavaminate synthase-like protein At3g21360... 0.02 OrthoFinder output from all 47 species
MA_10431045g0040 No alias Clavaminate synthase-like protein At3g21360... 0.02 OrthoFinder output from all 47 species
MA_867753g0010 No alias Clavaminate synthase-like protein At3g21360... 0.02 OrthoFinder output from all 47 species
Mp4g14250.1 No alias Clavaminate synthase-like protein At3g21360... 0.05 OrthoFinder output from all 47 species
Nbi_g25465 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g25382 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g40584 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003819 TauD/TfdA-like 38 311
No external refs found!