Aliases : PAM68
Description : protein involved in PS-II assembly *(PAM68) & original description: none
Gene families : OG0005725 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005725_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Dcu_g28925 | |
| Cluster | HCCA: Cluster_25 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00016p00088520 | evm_27.TU.AmTr_v1... | Photosynthesis.photophosphorylation.photosystem... | 0.09 | OrthoFinder output from all 47 species | |
| AMTR_s00048p00210800 | PAM68,... | Photosynthesis.photophosphorylation.photosystem... | 0.03 | OrthoFinder output from all 47 species | |
| AT4G19100 | PAM68 | Protein of unknown function (DUF3464) | 0.04 | OrthoFinder output from all 47 species | |
| AT5G52780 | No alias | Protein of unknown function (DUF3464) | 0.09 | OrthoFinder output from all 47 species | |
| Adi_g112211 | PAM68 | protein involved in PS-II assembly *(PAM68) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g112212 | PAM68 | protein involved in PS-II assembly *(PAM68) & original... | 0.08 | OrthoFinder output from all 47 species | |
| Aev_g21605 | PAM68 | protein involved in PS-II assembly *(PAM68) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Als_g24035 | PAM68 | protein involved in PS-II assembly *(PAM68) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g16015 | PAM68 | protein involved in PS-II assembly *(PAM68) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00021759.13 | PAM68 | Photosynthesis.photophosphorylation.photosystem... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01028843001 | No alias | Photosynthesis.photophosphorylation.photosystem... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g21530.1 | PAM68, LOC_Os06g21530 | PAM68 protein involved in PS-II assembly | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os10g38910.1 | LOC_Os10g38910 | PAM68 protein involved in PS-II assembly | 0.02 | OrthoFinder output from all 47 species | |
| MA_268175g0010 | PAM68 | PAM68 protein involved in PS-II assembly | 0.04 | OrthoFinder output from all 47 species | |
| Mp1g02230.1 | PAM68 | PAM68 protein involved in PS-II assembly | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g02243 | PAM68 | protein involved in PS-II assembly *(PAM68) & original... | 0.06 | OrthoFinder output from all 47 species | |
| Nbi_g09583 | PAM68 | protein involved in PS-II assembly *(PAM68) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g07606 | PAM68 | protein involved in PS-II assembly *(PAM68) & original... | 0.08 | OrthoFinder output from all 47 species | |
| Ore_g07607 | PAM68 | protein involved in PS-II assembly *(PAM68) & original... | 0.06 | OrthoFinder output from all 47 species | |
| Pir_g19463 | PAM68 | protein involved in PS-II assembly *(PAM68) & original... | 0.08 | OrthoFinder output from all 47 species | |
| Pnu_g12314 | PAM68 | protein involved in PS-II assembly *(PAM68) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c21_19650V3.1 | PAM68, Pp3c21_19650 | Protein of unknown function (DUF3464) | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g00344 | PAM68 | protein involved in PS-II assembly *(PAM68) & original... | 0.06 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0024.g009124 | PAM68 | protein involved in PS-II assembly *(PAM68) & original... | 0.06 | OrthoFinder output from all 47 species | |
| Solyc03g007860.1.1 | Solyc03g007860 | PAM68 protein involved in PS-II assembly | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
| MF | GO:0003746 | translation elongation factor activity | IEP | HCCA |
| MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
| MF | GO:0005261 | monoatomic cation channel activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005507 | copper ion binding | IEP | HCCA |
| MF | GO:0005509 | calcium ion binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0006414 | translational elongation | IEP | HCCA |
| BP | GO:0006754 | ATP biosynthetic process | IEP | HCCA |
| MF | GO:0008113 | peptide-methionine (S)-S-oxide reductase activity | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0009055 | electron transfer activity | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009522 | photosystem I | IEP | HCCA |
| CC | GO:0009523 | photosystem II | IEP | HCCA |
| CC | GO:0009538 | photosystem I reaction center | IEP | HCCA |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| MF | GO:0015252 | proton channel activity | IEP | HCCA |
| MF | GO:0015267 | channel activity | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| BP | GO:0015986 | proton motive force-driven ATP synthesis | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | HCCA |
| MF | GO:0016671 | oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | IEP | HCCA |
| CC | GO:0019898 | extrinsic component of membrane | IEP | HCCA |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| CC | GO:0033178 | proton-transporting two-sector ATPase complex, catalytic domain | IEP | HCCA |
| MF | GO:0033743 | peptide-methionine (R)-S-oxide reductase activity | IEP | HCCA |
| CC | GO:0034357 | photosynthetic membrane | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| CC | GO:0042651 | thylakoid membrane | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| CC | GO:0045261 | proton-transporting ATP synthase complex, catalytic core F(1) | IEP | HCCA |
| BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
| BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0046933 | proton-transporting ATP synthase activity, rotational mechanism | IEP | HCCA |
| BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
| CC | GO:0098796 | membrane protein complex | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| CC | GO:1902494 | catalytic complex | IEP | HCCA |
| CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR021855 | PAM68-like | 137 | 240 |
| No external refs found! |
