Dcu_g29348

Description : component *(eL27) of large ribosomal-subunit (LSU) proteome & original description: none

Gene families : OG0000924 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000924_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dcu_g29348
Cluster	HCCA: Cluster_123

Target	Alias	Description	ECC score	Gene Family Method
AT4G15000	No alias	Ribosomal L27e protein family	0.03	OrthoFinder output from all 47 species
Adi_g119864	No alias	component *(eL27) of large ribosomal-subunit (LSU)...	0.06	OrthoFinder output from all 47 species
Ala_g17792	No alias	component *(eL27) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Ala_g39103	No alias	component *(eL27) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Als_g25310	No alias	component *(eL27) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Als_g38390	No alias	component *(eL27) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Aop_g33173	No alias	component *(eL27) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Azfi_s0123.g048378	No alias	component *(eL27) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Cre17.g701650	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.03	OrthoFinder output from all 47 species
Dac_g26159	No alias	component *(eL27) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Mp4g23910.1	No alias	component RPL27 of LSU proteome component	0.02	OrthoFinder output from all 47 species
Nbi_g40024	No alias	component *(eL27) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Ore_g20757	No alias	component *(eL27) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Ore_g25402	No alias	component *(eL27) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Sam_g20317	No alias	component *(eL27) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Sam_g32165	No alias	component *(eL27) of large ribosomal-subunit (LSU)...	0.07	OrthoFinder output from all 47 species
Sam_g36664	No alias	component *(eL27) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Spa_g44975	No alias	component *(eL27) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Tin_g43604	No alias	component *(eL27) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR005824	KOW	7	32
IPR001141	Ribosomal_L27e	52	102

External Links

No external refs found!

Dcu_g29348

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation