Dcu_g29624

Description : component *(eL31) of large ribosomal-subunit (LSU) proteome & original description: none

Gene families : OG0000630 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000630_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dcu_g29624

Target	Alias	Description	ECC score	Gene Family Method
Adi_g113545	No alias	component *(eL31) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Adi_g120495	No alias	component *(eL31) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Als_g41863	No alias	component *(eL31) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Als_g58224	No alias	not classified & original description: none	0.08	OrthoFinder output from all 47 species
Aob_g09838	No alias	component *(eL31) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Aob_g10112	No alias	component *(eL31) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Aop_g20599	No alias	component *(eL31) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Aop_g29195	No alias	component *(eL31) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Aop_g71326	No alias	component *(eL31) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Dcu_g45156	No alias	component *(eL31) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Ppi_g19792	No alias	component *(eL31) of large ribosomal-subunit (LSU)...	0.06	OrthoFinder output from all 47 species
Sam_g05538	No alias	component *(eL31) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Sam_g39914	No alias	component *(eL31) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Tin_g42230	No alias	component *(eL31) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003779	actin binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
CC	GO:0005839	proteasome core complex	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000054	Ribosomal_L31e	18	98

External Links

No external refs found!

Dcu_g29624

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation