Dcu_g30645

Description : component *(eL31) of large ribosomal-subunit (LSU) proteome & original description: none

Gene families : OG0000630 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000630_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dcu_g30645

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00022p00233860	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.01	OrthoFinder output from all 47 species
Aop_g33204	No alias	component *(eL31) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 47 species
Azfi_s0108.g045264	No alias	component *(eL31) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 47 species
Dac_g07183	No alias	component *(eL31) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Dcu_g30287	No alias	component *(eL31) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Dde_g45427	No alias	component *(eL31) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 47 species
Pir_g49678	No alias	component *(eL31) of large ribosomal-subunit (LSU)...	0.09	OrthoFinder output from all 47 species
Pp3c14_7550V3.1	Pp3c14_7550	Ribosomal protein L31e family protein	0.01	OrthoFinder output from all 47 species
Ppi_g02505	No alias	component *(eL31) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Ppi_g16789	No alias	component *(eL31) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Ppi_g22733	No alias	component *(eL31) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 47 species
Ppi_g28410	No alias	component *(eL31) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Ppi_g28593	No alias	component *(eL31) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Sam_g36402	No alias	component *(eL31) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 47 species
Sam_g36403	No alias	component *(eL31) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 47 species
Spa_g33844	No alias	component *(eL31) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
BP	GO:0019941	modification-dependent protein catabolic process	IEP	HCCA
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0044265	cellular macromolecule catabolic process	IEP	HCCA
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	HCCA
BP	GO:1901575	organic substance catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000054	Ribosomal_L31e	16	96

External Links

No external refs found!

Dcu_g30645

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation