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  5. Dcu_g31028

Dcu_g31028


Description : protein involved in PS-II assembly *(HHL1) & original description: none


Gene families : OG0006939 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006939_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g31028
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00073250 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.05 OrthoFinder output from all 47 species
AT1G67700 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.13 OrthoFinder output from all 47 species
Adi_g033649 No alias protein involved in PS-II assembly *(HHL1) & original... 0.07 OrthoFinder output from all 47 species
Aev_g03714 No alias protein involved in PS-II assembly *(HHL1) & original... 0.05 OrthoFinder output from all 47 species
Ala_g07520 No alias protein involved in PS-II assembly *(HHL1) & original... 0.13 OrthoFinder output from all 47 species
Als_g00467 No alias protein involved in PS-II assembly *(HHL1) & original... 0.09 OrthoFinder output from all 47 species
Aob_g06998 No alias protein involved in PS-II assembly *(HHL1) & original... 0.08 OrthoFinder output from all 47 species
Aop_g06739 No alias protein involved in PS-II assembly *(HHL1) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0531.g075832 No alias protein involved in PS-II assembly *(HHL1) & original... 0.03 OrthoFinder output from all 47 species
Cba_g10861 No alias protein involved in PS-II assembly *(HHL1) & original... 0.03 OrthoFinder output from all 47 species
Ceric.07G086100.1 Ceric.07G086100 protein involved in PS-II assembly *(HHL1) & original... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020710.126 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre03.g146167 No alias Photosynthesis.photophosphorylation.photosystem... 0.04 OrthoFinder output from all 47 species
Dac_g16635 No alias protein involved in PS-II assembly *(HHL1) & original... 0.06 OrthoFinder output from all 47 species
Dde_g43832 No alias protein involved in PS-II assembly *(HHL1) & original... 0.06 OrthoFinder output from all 47 species
Ehy_g04373 No alias protein involved in PS-II assembly *(HHL1) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01010306001 No alias Photosynthesis.photophosphorylation.photosystem... 0.05 OrthoFinder output from all 47 species
Gb_36498 No alias HHL1 protein involved in PS-II assembly 0.1 OrthoFinder output from all 47 species
LOC_Os02g38820.1 LOC_Os02g38820 HHL1 protein involved in PS-II assembly 0.03 OrthoFinder output from all 47 species
Len_g53688 No alias protein involved in PS-II assembly *(HHL1) & original... 0.02 OrthoFinder output from all 47 species
Lfl_g05888 No alias protein involved in PS-II assembly *(HHL1) & original... 0.1 OrthoFinder output from all 47 species
MA_99789g0010 No alias HHL1 protein involved in PS-II assembly 0.07 OrthoFinder output from all 47 species
Mp4g20930.1 No alias HHL1 protein involved in PS-II assembly 0.05 OrthoFinder output from all 47 species
Msp_g02701 No alias protein involved in PS-II assembly *(HHL1) & original... 0.06 OrthoFinder output from all 47 species
Nbi_g12181 No alias protein involved in PS-II assembly *(HHL1) & original... 0.09 OrthoFinder output from all 47 species
Ore_g28473 No alias protein involved in PS-II assembly *(HHL1) & original... 0.1 OrthoFinder output from all 47 species
Ore_g32779 No alias protein involved in PS-II assembly *(HHL1) & original... 0.04 OrthoFinder output from all 47 species
Pir_g13350 No alias protein involved in PS-II assembly *(HHL1) & original... 0.09 OrthoFinder output from all 47 species
Pnu_g10877 No alias protein involved in PS-II assembly *(HHL1) & original... 0.05 OrthoFinder output from all 47 species
Pp3c14_9580V3.1 Pp3c14_9580 No annotation 0.02 OrthoFinder output from all 47 species
Ppi_g54816 No alias protein involved in PS-II assembly *(HHL1) & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006133 No alias protein involved in PS-II assembly *(HHL1) & original... 0.03 OrthoFinder output from all 47 species
Sam_g09632 No alias protein involved in PS-II assembly *(HHL1) & original... 0.05 OrthoFinder output from all 47 species
Solyc05g014310.3.1 Solyc05g014310 HHL1 protein involved in PS-II assembly 0.09 OrthoFinder output from all 47 species
Zm00001e015029_P001 Zm00001e015029 HHL1 protein involved in PS-II assembly 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004096 catalase activity IEP HCCA
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR045388 HHL1-like 56 169
No external refs found!