1. Home
  2. Species
  3. Dicranopteris curranii
  4. Sequence
  5. Dcu_g31601

Dcu_g31601


Description : not classified & original description: none


Gene families : OG0000120 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000120_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g31601

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00067000 evm_27.TU.AmTr_v1... Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00049p00200350 evm_27.TU.AmTr_v1... Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Adi_g060246 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g102181 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g24129 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26133 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g12260 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g16236 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08667 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0149.g053226 No alias not classified & original description: CDS=547-1935 0.03 OrthoFinder output from all 47 species
Cba_g33385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.12G066500.1 Ceric.12G066500 not classified & original description: pacid=50602160... 0.04 OrthoFinder output from all 47 species
Ceric.24G054300.1 Ceric.24G054300 not classified & original description: pacid=50629415... 0.02 OrthoFinder output from all 47 species
Ceric.35G060600.1 Ceric.35G060600 not classified & original description: pacid=50581737... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001130.27 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Ehy_g04644 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g07789 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14502 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16051 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g16526 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g16527 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16933 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01012784001 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_39961 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g03813 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g13554 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g17314 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19867 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g45356 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06009 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_473g0010 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_93349g0010 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Nbi_g00898 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g12149 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19415 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19973 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40736 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g02420 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g08248 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0054.g014264 No alias not classified & original description: CDS=1-1203 0.05 OrthoFinder output from all 47 species
Sam_g15340 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g28907 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc03g121710.2.1 Solyc03g121710 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc09g090520.3.1 Solyc09g090520 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g11285 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g18077 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18557 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g21542 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g21639 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g30731 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g57176 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002844_P001 Zm00001e002844 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e024336_P003 Zm00001e024336 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e024934_P002 Zm00001e024934 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e030652_P001 Zm00001e030652 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 68 135
IPR000504 RRM_dom 155 222
No external refs found!