Dcu_g34128 (AGL21)

Aliases : AGL21

Description : not classified & original description: none

Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dcu_g34128

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00127p00060060	SVP, AGL22,...	RNA biosynthesis.transcriptional activation.MADS box...	0.03	OrthoFinder output from all 47 species
Adi_g001519	AGL16	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene15809.t1	SHP2, AGL5,...	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene15816.t1	SOC1, AGL20,...	MADS/AGL-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Aspi01Gene68989.t2	SOC1, AGL20,...	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0003.g007710	AGL6	MADS/AGL-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Cba_g32938	SHP2, AGL5	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g05429	SHP2, AGL5	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01009171001	SVP, AGL22	RNA biosynthesis.transcriptional activation.MADS box...	0.03	OrthoFinder output from all 47 species
GSVIVT01012110001	AGL32, TT16, ABS	RNA biosynthesis.transcriptional activation.MADS box...	0.02	OrthoFinder output from all 47 species
GSVIVT01012250001	AGL7, AP1	RNA biosynthesis.transcriptional activation.MADS box...	0.03	OrthoFinder output from all 47 species
LOC_Os02g01355.1	SOC1, AGL20,...	transcription factor (MADS/AGL)	0.03	OrthoFinder output from all 47 species
LOC_Os03g54170.1	AGL2, SEP1,...	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
LOC_Os07g01820.1	AGL7, AP1, LOC_Os07g01820	transcription factor (MADS/AGL)	0.03	OrthoFinder output from all 47 species
Lfl_g16827	AGL21	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g37644	AGL21	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g38730	AGL8, FUL	not classified & original description: none	0.04	OrthoFinder output from all 47 species
MA_16629g0010	ANR1, AGL44	transcription factor (MADS/AGL)	0.03	OrthoFinder output from all 47 species
MA_19296g0010	AGL9, SEP3	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_2986g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Ore_g04651	AGL2, SEP1	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g56527	AGL3, SEP4	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Solyc02g091550.2.1	AGL21, Solyc02g091550	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
Solyc04g005320.3.1	AGL2, SEP1,...	transcription factor (MADS/AGL)	0.03	OrthoFinder output from all 47 species
Solyc05g012020.4.1	AGL2, SEP1,...	transcription factor (MADS/AGL)	0.04	OrthoFinder output from all 47 species
Solyc06g069430.3.1	AGL8, FUL, Solyc06g069430	transcription factor (MADS/AGL)	0.03	OrthoFinder output from all 47 species
Solyc10g017630.3.1	SOC1, AGL20,...	MADS-box protein SOC1 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Solyc10g080030.2.1	AGL18, Solyc10g080030	transcription factor (MADS/AGL)	0.03	OrthoFinder output from all 47 species
Spa_g45506	SOC1, AGL20, ATSOC1	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e006950_P001	AGL32, TT16,...	transcription factor (MADS/AGL)	0.03	OrthoFinder output from all 47 species
Zm00001e030373_P001	AGL10, CAL1,...	transcription factor (MADS/AGL)	0.03	OrthoFinder output from all 47 species
Zm00001e039774_P001	SHP2, AGL5,...	transcription factor (MADS/AGL)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
BP	GO:0035556	intracellular signal transduction	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002487	TF_Kbox	118	185

External Links

No external refs found!

Dcu_g34128 (AGL21)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation