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  5. Aev_g28189

Aev_g28189


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g28189

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00014p00090010 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species
AMTR_s00044p00169670 CRR22,... Pentatricopeptide repeat-containing protein At2g17210... 0.02 OrthoFinder output from all 47 species
AT3G49142 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G53360 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G16835 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G08490 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g005795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g040548 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g075672 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g02416 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04452 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g11263 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19046 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19114 EMB2261 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g54704 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g05294 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g10916 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g13601 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27895 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g37100 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0010.g012363 No alias not classified & original description: CDS=1-2442 0.03 OrthoFinder output from all 47 species
Azfi_s0010.g012416 No alias not classified & original description: CDS=1-1722 0.03 OrthoFinder output from all 47 species
Azfi_s0028.g023921 No alias not classified & original description: CDS=1-2157 0.02 OrthoFinder output from all 47 species
Azfi_s0035.g025464 No alias not classified & original description: CDS=1-2154 0.03 OrthoFinder output from all 47 species
Azfi_s0068.g036354 CRR22 not classified & original description: CDS=140-2386 0.02 OrthoFinder output from all 47 species
Azfi_s0118.g046614 No alias not classified & original description: CDS=1-2319 0.02 OrthoFinder output from all 47 species
Azfi_s0158.g053860 CRR2 not classified & original description: CDS=1-978 0.03 OrthoFinder output from all 47 species
Azfi_s0194.g057201 No alias not classified & original description: CDS=1-3408 0.02 OrthoFinder output from all 47 species
Azfi_s0261.g060752 CRR22 not classified & original description: CDS=1-1500 0.02 OrthoFinder output from all 47 species
Azfi_s1334.g101644 No alias not classified & original description: CDS=1-3543 0.02 OrthoFinder output from all 47 species
Cba_g37478 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g37586 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g57497 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.38G015500.1 Ceric.38G015500 not classified & original description: pacid=50579581... 0.02 OrthoFinder output from all 47 species
Ceric.39G022100.1 Ceric.39G022100 not classified & original description: pacid=50582510... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001038.5 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g19046 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g19085 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g42553 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g42856 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07701 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38414 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12101 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g23831 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008407001 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
LOC_Os10g40920.1 LOC_Os10g40920 RNA editing factor (MEF13) 0.02 OrthoFinder output from all 47 species
Len_g07899 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g12295 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g15615 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18805 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18953 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19011 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04970 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g17466 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g28021 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17268 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g04708 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g20793 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g40890 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12550 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57349 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57724 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06488 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06986 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g11120 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g43260 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g48248 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g57496 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003776 No alias not classified & original description: CDS=1-3675 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0066.g016088 No alias not classified & original description: CDS=1-1020 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0232.g026457 No alias not classified & original description: CDS=1-363 0.03 OrthoFinder output from all 47 species
Sam_g27788 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo113974 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Smo76916 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.02 OrthoFinder output from all 47 species
Smo79732 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Solyc06g064600.1.1 Solyc06g064600 Pentatricopeptide repeat-containing protein At1g56690,... 0.02 OrthoFinder output from all 47 species
Solyc09g009950.4.1 Solyc09g009950 RNA editing factor (MEF10) 0.02 OrthoFinder output from all 47 species
Solyc12g099850.1.1 Solyc12g099850 Pentatricopeptide repeat-containing protein At1g18485... 0.03 OrthoFinder output from all 47 species
Tin_g25311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e013713_P001 Zm00001e013713 Pentatricopeptide repeat-containing protein At4g20770... 0.02 OrthoFinder output from all 47 species
Zm00001e021453_P001 CRR28, Zm00001e021453 Pentatricopeptide repeat-containing protein At5g06540... 0.02 OrthoFinder output from all 47 species
Zm00001e022858_P001 Zm00001e022858 Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 427 452
IPR002885 Pentatricopeptide_repeat 528 552
IPR002885 Pentatricopeptide_repeat 832 858
IPR002885 Pentatricopeptide_repeat 351 399
IPR002885 Pentatricopeptide_repeat 149 198
IPR002885 Pentatricopeptide_repeat 453 500
IPR002885 Pentatricopeptide_repeat 554 602
IPR002885 Pentatricopeptide_repeat 756 804
IPR002885 Pentatricopeptide_repeat 655 703
IPR002885 Pentatricopeptide_repeat 251 298
No external refs found!