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  5. Dcu_g35622

Dcu_g35622


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g35622

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00242080 CRR28,... Pentatricopeptide repeat-containing protein At1g59720,... 0.02 OrthoFinder output from all 47 species
AMTR_s00130p00019530 DOT4,... Pentatricopeptide repeat-containing protein DOT4,... 0.02 OrthoFinder output from all 47 species
Ala_g36540 OTP84 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g01606 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g03408 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g70660 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s1756.g106494 No alias not classified & original description: CDS=1-1938 0.06 OrthoFinder output from all 47 species
Ceric.10G029900.1 Ceric.10G029900 not classified & original description: pacid=50612941... 0.05 OrthoFinder output from all 47 species
Dde_g15911 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g21844 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g47962 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01033735001 emb1899, EMB175, EMB166 Pentatricopeptide repeat-containing protein At5g03800... 0.06 OrthoFinder output from all 47 species
Nbi_g08946 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g22679 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g23638 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Smo106861 OTP82 Pentatricopeptide repeat-containing protein At2g13600... 0.11 OrthoFinder output from all 47 species
Solyc08g076150.4.1 Solyc08g076150 Pentatricopeptide repeat-containing protein At1g31920... 0.04 OrthoFinder output from all 47 species
Zm00001e034445_P001 LPA66, Zm00001e034445 Pentatricopeptide repeat-containing protein At5g48910... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
MF GO:0060590 ATPase regulator activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR032867 DYW_dom 744 837
IPR046848 E_motif 646 708
IPR002885 Pentatricopeptide_repeat 200 225
IPR002885 Pentatricopeptide_repeat 403 428
IPR002885 Pentatricopeptide_repeat 298 326
IPR046849 Eplus_motif 713 741
IPR002885 Pentatricopeptide_repeat 429 475
IPR002885 Pentatricopeptide_repeat 124 171
IPR002885 Pentatricopeptide_repeat 226 272
IPR002885 Pentatricopeptide_repeat 531 575
IPR002885 Pentatricopeptide_repeat 327 373
No external refs found!