Dcu_g35895


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g35895
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
AT1G15510 VAC1, ECB2, ATECB2 Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g099248 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101245 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02043 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g04237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g08715 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g12581 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13294 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17255 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g18876 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g19723 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g20488 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g21955 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24743 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g27705 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g30600 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30723 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g31152 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g34486 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g35870 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g35880 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36528 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g37466 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g38563 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g03252 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05139 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05758 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06012 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06396 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06398 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06831 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g07410 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07424 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07465 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18804 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19261 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19262 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20750 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g26644 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26698 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g29342 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30299 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30788 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30906 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g32436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55111 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55222 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27895 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27921 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28242 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g09405 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16534 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g18280 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g22510 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28235 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g30728 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33022 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67877 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0035.g025724 No alias not classified & original description: CDS=1-3840 0.03 OrthoFinder output from all 47 species
Azfi_s0104.g044765 No alias not classified & original description: CDS=1-2373 0.03 OrthoFinder output from all 47 species
Azfi_s0210.g058082 No alias not classified & original description: CDS=1-2637 0.04 OrthoFinder output from all 47 species
Cba_g03341 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g04039 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g04691 EMB2261 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g04703 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g04710 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05270 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06552 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20659 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20864 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g24198 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g26848 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g34546 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34772 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67033 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67647 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67802 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.10G013000.1 EMB2758, Ceric.10G013000 not classified & original description: pacid=50613337... 0.03 OrthoFinder output from all 47 species
Ceric.13G076400.1 Ceric.13G076400 not classified & original description: pacid=50635248... 0.03 OrthoFinder output from all 47 species
Ceric.17G003100.1 Ceric.17G003100 not classified & original description: pacid=50617164... 0.04 OrthoFinder output from all 47 species
Ceric.18G024700.1 Ceric.18G024700 not classified & original description: pacid=50621916... 0.03 OrthoFinder output from all 47 species
Ceric.18G069700.1 CRR2, Ceric.18G069700 not classified & original description: pacid=50622363... 0.03 OrthoFinder output from all 47 species
Ceric.20G006900.1 Ceric.20G006900 not classified & original description: pacid=50565918... 0.05 OrthoFinder output from all 47 species
Ceric.21G080700.1 Ceric.21G080700 not classified & original description: pacid=50603857... 0.03 OrthoFinder output from all 47 species
Ceric.23G082400.1 CRR22, Ceric.23G082400 not classified & original description: pacid=50611294... 0.05 OrthoFinder output from all 47 species
Ceric.30G025700.1 CRR22, Ceric.30G025700 not classified & original description: pacid=50609433... 0.04 OrthoFinder output from all 47 species
Dac_g03359 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g13728 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18714 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g19071 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g20347 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g22020 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g25030 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g35670 DOT4 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g42650 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08084 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17233 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g50085 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g50973 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03951 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04879 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05757 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g08678 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09537 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g12887 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g17623 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g19488 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g19602 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g19625 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24220 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28218 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g28696 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g34076 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g36375 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g40646 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g41697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50404 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01021756001 No alias Pentatricopeptide repeat-containing protein At4g21300... 0.03 OrthoFinder output from all 47 species
LOC_Os01g27650.1 LOC_Os01g27650 Pentatricopeptide repeat-containing protein At2g33680... 0.03 OrthoFinder output from all 47 species
LOC_Os03g59264.1 LOC_Os03g59264 lectin chaperone (CRT) 0.03 OrthoFinder output from all 47 species
LOC_Os05g12130.1 EMB2261, LOC_Os05g12130 RNA editing factor (ECD1) 0.03 OrthoFinder output from all 47 species
LOC_Os05g24150.1 LOC_Os05g24150 Pentatricopeptide repeat-containing protein At2g34400... 0.02 OrthoFinder output from all 47 species
LOC_Os05g49920.1 VAC1, ECB2,... RNA editing factor (ECB2/VAC1) 0.03 OrthoFinder output from all 47 species
LOC_Os06g08660.1 LOC_Os06g08660 Pentatricopeptide repeat-containing protein At4g30700... 0.04 OrthoFinder output from all 47 species
LOC_Os08g06490.2 SLO1, LOC_Os08g06490 Pentatricopeptide repeat-containing protein At4g22760... 0.03 OrthoFinder output from all 47 species
LOC_Os08g33700.1 LOC_Os08g33700 Pentatricopeptide repeat-containing protein At3g47530... 0.03 OrthoFinder output from all 47 species
Len_g03390 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g19232 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g32688 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05723 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33322 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g35606 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g04514 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g05393 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g13731 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g28536 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g40965 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g04960 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g05468 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g10444 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20274 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g20618 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g24679 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g28139 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g29103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38474 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g08941 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20793 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g22640 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43142 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g02846 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03061 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g11403 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g19109 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57713 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63397 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63498 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63649 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63843 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06505 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06944 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g08795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18601 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g18927 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g22095 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29289 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g45354 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g52997 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53028 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55201 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g59294 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63671 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007051 CRR22 not classified & original description: CDS=50-2191 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012842 CRR2 not classified & original description: CDS=114-1901 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015039 No alias not classified & original description: CDS=1-1803 0.03 OrthoFinder output from all 47 species
Smo100621 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Spa_g06412 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g44841 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g45053 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05566 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07718 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13752 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g17885 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26549 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g26904 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g31206 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e013713_P001 Zm00001e013713 Pentatricopeptide repeat-containing protein At4g20770... 0.03 OrthoFinder output from all 47 species
Zm00001e029119_P001 Zm00001e029119 Pentatricopeptide repeat-containing protein At2g33760... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 719 743
IPR002885 Pentatricopeptide_repeat 317 339
IPR046848 E_motif 762 816
IPR002885 Pentatricopeptide_repeat 343 389
IPR002885 Pentatricopeptide_repeat 543 591
IPR002885 Pentatricopeptide_repeat 140 187
IPR002885 Pentatricopeptide_repeat 444 492
IPR002885 Pentatricopeptide_repeat 242 289
IPR002885 Pentatricopeptide_repeat 645 692
No external refs found!