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  5. Dcu_g36076

Dcu_g36076


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g36076

Target Alias Description ECC score Gene Family Method Actions
AT3G49740 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G14850 LOI1, MEF11 Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G39530 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G09950 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G65570 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g025455 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034914 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g080993 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g32627 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g32974 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g42385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02043 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g03960 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06600 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g09699 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g13180 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20389 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g21860 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g23930 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g31944 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05108 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06720 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07213 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07268 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07480 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07519 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18767 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26632 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26635 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g27203 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30426 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30855 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30880 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32754 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g38696 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g59996 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27846 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g28193 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g37094 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g37100 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g37344 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g37584 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g37595 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g40212 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08796 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09405 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20705 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33118 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68030 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68085 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g69297 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02536.t1 Aspi01Gene02536 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24209.t1 VAC1, ECB2,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60513.t1 Aspi01Gene60513 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0002.g001409 No alias not classified & original description: CDS=1-2469 0.03 OrthoFinder output from all 47 species
Azfi_s0114.g046172 No alias not classified & original description: CDS=1-2679 0.05 OrthoFinder output from all 47 species
Cba_g05443 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19795 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20164 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29580 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g45986 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.03G011500.1 Ceric.03G011500 not classified & original description: pacid=50571528... 0.04 OrthoFinder output from all 47 species
Ceric.11G015200.1 Ceric.11G015200 not classified & original description: pacid=50595684... 0.06 OrthoFinder output from all 47 species
Ceric.13G057100.1 Ceric.13G057100 not classified & original description: pacid=50635531... 0.04 OrthoFinder output from all 47 species
Ceric.14G013000.1 Ceric.14G013000 not classified & original description: pacid=50634838... 0.03 OrthoFinder output from all 47 species
Ceric.39G004000.1 EMB2758, Ceric.39G004000 not classified & original description: pacid=50582620... 0.03 OrthoFinder output from all 47 species
Ceric.39G045800.1 VAC1, ECB2,... not classified & original description: pacid=50583112... 0.04 OrthoFinder output from all 47 species
Dcu_g38639 CRR2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g16374 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g50245 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g18216 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24017 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os03g56850.1 LOC_Os03g56850 Pentatricopeptide repeat-containing protein At4g21300... 0.03 OrthoFinder output from all 47 species
LOC_Os07g15570.1 CRR2, LOC_Os07g15570 Pentatricopeptide repeat-containing protein At2g46050,... 0.03 OrthoFinder output from all 47 species
LOC_Os07g39090.1 LOC_Os07g39090 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os08g37520.1 LOC_Os08g37520 Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
LOC_Os12g15460.1 LOC_Os12g15460 Pentatricopeptide repeat-containing protein At1g18485... 0.03 OrthoFinder output from all 47 species
Len_g03404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g30657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g43024 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g43654 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07032 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g12140 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19657 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g28057 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g35996 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38215 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10430171g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
MA_11138g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Mp5g04990.1 PTAC9, OSB2 ssDNA-binding protein (OSB). TAC9 cofactor of... 0.02 OrthoFinder output from all 47 species
Msp_g19490 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g22344 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g23174 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28092 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28108 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g41373 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15680 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16471 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g28122 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g18652 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26690 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g45078 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g14836 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05632 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06373 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07585 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12807 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g30227 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g35953 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53028 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53366 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53959 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g58118 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g63789 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g12347 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29713 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g40571 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g51263 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g053520.2.1 SLO1, Solyc07g053520 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Solyc09g007040.1.1 Solyc09g007040 Pentatricopeptide repeat-containing protein At3g53360,... 0.03 OrthoFinder output from all 47 species
Solyc09g090220.3.1 Solyc09g090220 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Solyc12g099850.1.1 Solyc12g099850 Pentatricopeptide repeat-containing protein At1g18485... 0.04 OrthoFinder output from all 47 species
Spa_g13913 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g18869 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23504 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g22909 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g26904 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e008200_P001 Zm00001e008200 Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 383 406
IPR002885 Pentatricopeptide_repeat 179 207
IPR002885 Pentatricopeptide_repeat 151 177
IPR002885 Pentatricopeptide_repeat 283 307
IPR002885 Pentatricopeptide_repeat 309 356
IPR002885 Pentatricopeptide_repeat 410 457
IPR002885 Pentatricopeptide_repeat 510 558
IPR002885 Pentatricopeptide_repeat 210 256
IPR002885 Pentatricopeptide_repeat 578 609
No external refs found!