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  5. Dcu_g36209

Dcu_g36209


Description : ribosome biogenesis factor *(CRASS) & original description: none


Gene families : OG0007938 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007938_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g36209
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00224760 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT5G14910 No alias Heavy metal transport/detoxification superfamily protein 0.12 OrthoFinder output from all 47 species
Aev_g02821 No alias ribosome biogenesis factor *(CRASS) & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g13367 No alias ribosome biogenesis factor *(CRASS) & original description: none 0.1 OrthoFinder output from all 47 species
Aob_g04787 No alias ribosome biogenesis factor *(CRASS) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06536 No alias ribosome biogenesis factor *(CRASS) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0250.g060247 No alias ribosome biogenesis factor *(CRASS) & original... 0.06 OrthoFinder output from all 47 species
Ceric.01G033000.1 Ceric.01G033000 ribosome biogenesis factor *(CRASS) & original... 0.14 OrthoFinder output from all 47 species
Dde_g11519 No alias ribosome biogenesis factor *(CRASS) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g05290 No alias ribosome biogenesis factor *(CRASS) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01032527001 No alias No description available 0.08 OrthoFinder output from all 47 species
Gb_22864 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g27100.1 LOC_Os05g27100 ribosome biogenesis factor (CRASS) 0.13 OrthoFinder output from all 47 species
Len_g14822 No alias ribosome biogenesis factor *(CRASS) & original description: none 0.09 OrthoFinder output from all 47 species
Lfl_g37391 No alias ribosome biogenesis factor *(CRASS) & original description: none 0.05 OrthoFinder output from all 47 species
MA_59576g0010 No alias ribosome biogenesis factor (CRASS) 0.05 OrthoFinder output from all 47 species
Mp6g04290.1 No alias ribosome biogenesis factor (CRASS) 0.15 OrthoFinder output from all 47 species
Msp_g44058 No alias ribosome biogenesis factor *(CRASS) & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g44614 No alias ribosome biogenesis factor *(CRASS) & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g05841 No alias ribosome biogenesis factor *(CRASS) & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c1_25290V3.1 Pp3c1_25290 Heavy metal transport/detoxification superfamily protein 0.03 OrthoFinder output from all 47 species
Ppi_g00577 No alias ribosome biogenesis factor *(CRASS) & original description: none 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0180.g024792 No alias ribosome biogenesis factor *(CRASS) & original... 0.04 OrthoFinder output from all 47 species
Sam_g13302 No alias ribosome biogenesis factor *(CRASS) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g087150.3.1 Solyc02g087150 ribosome biogenesis factor (CRASS) 0.08 OrthoFinder output from all 47 species
Spa_g10440 No alias ribosome biogenesis factor *(CRASS) & original description: none 0.1 OrthoFinder output from all 47 species
Zm00001e031534_P001 Zm00001e031534 ribosome biogenesis factor (CRASS) 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0098809 nitrite reductase activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR006121 HMA_dom 140 191
No external refs found!