Aliases : ARF6
Description : ARF-type transcription factor & original description: none
Gene families : OG0000088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000088_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00029p00157690 | ARF6,... | RNA biosynthesis.transcriptional activation.B3... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G30330 | ARF6 | auxin response factor 6 | 0.02 | OrthoFinder output from all 47 species | |
| AT5G20730 | TIR5, MSG1,... | Transcriptional factor B3 family protein /... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g089250 | ARF6 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g06038 | ARF6 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g06926 | ARF1 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g11014 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g14726 | ARF6 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g32717 | ARF8, ATARF8 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g49574 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g02260 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g07961 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g22075 | ARF6 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene33428.t1 | HSS, ARF1-BP,... | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0065.g035933 | ARF6 | not classified & original description: CDS=1-678 | 0.01 | OrthoFinder output from all 47 species | |
| Cba_g07702 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g19294 | ARF16 | ARF-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.18G060100.1 | ARF1, Ceric.18G060100 | ARF-type transcription factor & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g46643 | HSS, ARF1-BP, ARF2, ORE14 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g08602 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01009865001 | MP, IAA24, ARF5 | RNA biosynthesis.transcriptional activation.B3... | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01015035001 | ARF19, IAA22, ARF11 | RNA biosynthesis.transcriptional activation.B3... | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01035204001 | ARF8, ATARF8 | RNA biosynthesis.transcriptional activation.B3... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01035205001 | ARF8, ATARF8 | Auxin response factor 12 OS=Oryza sativa subsp. japonica | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g36054.1 | ARF1, LOC_Os04g36054 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g08347 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Mp1g07070.1 | ARF10 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g10001 | ARF6 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g42999 | ARF6 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0068.g016361 | ARF16 | ARF-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g081240.2.1 | MP, IAA24, ARF5,... | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc11g069190.2.1 | ARF4, Solyc11g069190 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc12g042070.3.1 | HSS, ARF1-BP,... | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g12615 | ARF16 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e003591_P003 | ARF19, IAA22,... | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e014833_P002 | ARF1, Zm00001e014833 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e030325_P003 | ARF6, Zm00001e030325 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000271 | polysaccharide biosynthetic process | IEP | HCCA |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | HCCA |
| BP | GO:0006073 | cellular glucan metabolic process | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0009250 | glucan biosynthetic process | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | HCCA |
| BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
| MF | GO:0016759 | cellulose synthase activity | IEP | HCCA |
| MF | GO:0016760 | cellulose synthase (UDP-forming) activity | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| BP | GO:0030243 | cellulose metabolic process | IEP | HCCA |
| BP | GO:0030244 | cellulose biosynthetic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
| BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | HCCA |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | HCCA |
| MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | HCCA |
| BP | GO:0044042 | glucan metabolic process | IEP | HCCA |
| BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | HCCA |
| MF | GO:0046527 | glucosyltransferase activity | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0051273 | beta-glucan metabolic process | IEP | HCCA |
| BP | GO:0051274 | beta-glucan biosynthetic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| No external refs found! |
